Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 125 6e-24
seq9764 98.7 9e-16
seq22504 95.1 1e-14
>seq9911
Length=12084
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| || || ||||| || ||| | || || | ||||| ||| |
Sbjct 6210 ATGCAGATCTTTGTGAAGACTTTAACTGGTAAAACAATTACATTGGAAGTGGAACCTTCA 6151
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || |||||| | |||||| || || || ||||| ||||| || || |||||
Sbjct 6150 GACACCATCGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCAA 6091
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| || | || | | |||||| ||| | ||||||| | | | | | |||||||||
Sbjct 6090 CAGCGATTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACTCTATCTGATTACAAT 6031
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||| ||||| ||||| ||||||| ||||||||||||||||||||
Sbjct 6030 ATTCAGAAAGAGTCCACACTTCATTTGGTGTTAAGATTGAGAGGAGG 5984
Score = 109 bits (120), Expect = 5e-19
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||||||||| | || |||||| | || || | ||||| ||| ||| |
Sbjct 4578 ATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAA-CCATC 4520
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| || || || | || ||| |||||| || ||||| |||||||| || || ||
Sbjct 4519 GGACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACCA 4460
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTAC 25351
|||| | | |||| | ||| |||||| | || |||| | | | ||| |||||
Sbjct 4459 GCAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCA--GATTAT 4402
Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||| ||||||||||| || | || ||||| || |||||||||||||
Sbjct 4401 AATATCCAAAAAGAATCTACACTGCACTTAGTCTTGCGATTGAGAGGAGG 4352
Score = 102 bits (112), Expect = 7e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| ||||| ||||| || || | || || | ||||| ||| ||| |
Sbjct 5034 ATGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAA-CCAGC 4976
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
||||| || || | || ||| ||| ||| || || || || || || ||||||||
Sbjct 4975 TGATACCATAGAAAATGTGAAAGCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGATCA 4916
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
||| | | || | | ||||| ||| | ||||||| | | | | | ||||||||
Sbjct 4915 ACAACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAA 4856
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403
||||||||| ||||| || |||| | || ||| | |||||||||||||
Sbjct 4855 TATTCAAAAGGAATCAACTCTTCACCTGGTATTACGGTTGAGAGGAGGAA 4806
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| ||||| | || ||||| | || || | ||||| ||| |
Sbjct 4806 ATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTCT 4747
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|||||||||||| | | ||| || || || ||||| || ||||| || |||||
Sbjct 4746 GATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCAA 4687
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| | | |||| | || ||||| | ||||||| | | | | | ||||| ||
Sbjct 4686 CAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAAC 4627
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403
||||| ||||||||||| | ||||| || || ||||| ||||||||||
Sbjct 4626 ATTCAGAAAGAATCCACTCTACATTTGGTATTGAGATTAAGAGGAGGAA 4578
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| || || | || || ||| | ||||| | ||||| ||| |
Sbjct 4350 ATGCAAATATTTGTTAAGACCCTTACTGGGAAAACTATCACATTGGAAGTAGAACCTTCA 4291
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| || || | || ||| |||||| |||||||| ||||| || || ||||||
Sbjct 4290 GATACAATTGAAAACGTTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCTCCAGATCAG 4231
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| | | || | | || |||||| | ||||||| ||| | | |||||||||
Sbjct 4230 CAGCGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGGCGAACTCTTTCAGATTACAAT 4171
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383
|||||||| ||||| ||| | ||||| ||
Sbjct 4170 ATTCAAAAGGAATCTACCCTACATTTGGT 4142
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCA-A 25233
|||||| | ||||||||||| || || |||||| | || || | ||||| | |||||
Sbjct 5718 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTG-AGCCATC 5660
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|||||| || || | |||||| ||||||| || || || || || || || || ||
Sbjct 5659 CGATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCA 5600
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTAC 25351
||| | | || | || ||||| ||| | ||||||| | | |||| || |||
Sbjct 5599 ACAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGTACATTGTC--TGACTAC 5542
Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||| ||||| ||||| || | ||||| ||| | | || ||||| ||
Sbjct 5541 AATATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGG 5492
>seq9764
Length=88291
Score = 98.7 bits (108), Expect = 9e-16
Identities = 306/463 (66%), Gaps = 22/463 (5%)
Strand=Plus/Plus
Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698
|| |||||||| || | || ||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct 27306 ACAGTGAATTGTATAGGCTTTGCGGCTGGTTTCGTTCTTAGATAATACATTCCCGTCTTC 27365
Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758
||||| |||| ||| || ||| || |||| | || || || || | |
Sbjct 27366 AAACCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCG 27425
Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818
||| ||||| ||||| || |||||||||||| ||| || || || || | | || |
Sbjct 27426 ACGTGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCG-CTTGGTT 27484
Query 136819 AATAGT-ACTTTTTGCTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCGG 136877
|||| | || || | |||||||| ||||||| ||| || ||||| || |||
Sbjct 27485 AATAATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGG 27544
Query 136878 AATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGAT---TTTCATCATGAGATC 136934
||| | |||||||||| || || || || ||| ||| ||||| ||
Sbjct 27545 TATTCCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATG---TC 27601
Query 136935 AGTCGAGTATACGTTGCTCTCTATGAGT-TTATCG---ACGAGATGCTGATTTACTACTT 136990
|||| | | ||||||| || |||| | ||||| ||||| || || |
Sbjct 27602 -GTCG---TCCCAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGATTAACGACCT 27657
Query 136991 GATATTCGCCCGATAGCAC---TCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACG 137047
| |||| || || | || |||| || ||| | || |||| |||| || || |
Sbjct 27658 GGAATTCTCCAGACAAGACGCGTCTG-GT--GTAGATGTTCGAAGTGTACGGTTCAAAGG 27714
Query 137048 ATTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCAT 137090
||||||| || || || || || || |||| |||||||||||
Sbjct 27715 ATTCGTTATTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCAT 27757
Score = 87.8 bits (96), Expect = 2e-12
Identities = 177/260 (68%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698
|| |||||||| || | || ||||| ||||| || || || || ||||| ||||||||
Sbjct 24170 ACAGTGAATTGTATAGGTTTTGCGGCTGGTTTCGTCCTTAGGTAATACATTCCCGTCTTC 24229
Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758
||||| |||| ||| || ||| || |||| | || || || || | |
Sbjct 24230 AAACCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCG 24289
Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818
||| ||||| ||||| || |||||||||||| ||| || || || || | | || |
Sbjct 24290 ACGTGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCG-CTTGGTT 24348
Query 136819 AATAGT-ACTTTTTGCTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCGG 136877
|||| | || || | |||||||| ||||||| ||| || ||||| || |||
Sbjct 24349 AATAATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGG 24408
Query 136878 AATTTCATCGATATTCTGTA 136897
||| | ||||||||||
Sbjct 24409 TATTCCCGGAATATTCTGTA 24428
>seq22504
Length=90246
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || |||||| | || || ||| | || || |||| || ||| | |
Sbjct 25532 ATGCAAATTTTCGTGAAAACACTTACAGGGAAAACAATAACCCTCGAGGTTGAACCTTCC 25591
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| ||||| | ||||| |||||| || || || ||||| || |||||||||
Sbjct 25592 GATACGATCGAAAATGTAAAGGCTAAAATTCAAGACAAGGAAGGTATCCCACCCGATCAG 25651
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
||| | || || | || || ||||| | ||||| | | | | | | ||||| |||
Sbjct 25652 CAACGTCTTATATTCGCTGGTAAACAGTTGGAAGACGGTCGTACTCTATCGGATTATAAT 25711
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| || || |||||||| | || || ||||| | ||||| || ||
Sbjct 25712 ATCCAGAAGGAATCCACTTTGCACTTGGTGTTGCGTTTGAGGGGTGG 25758
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/200 (71%), Gaps = 1/200 (1%)
Strand=Plus/Plus
Query 25202 GGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAA 25261
|||||| | || || |||| || ||| | |||||| ||||| | ||||| |||
Sbjct 21015 GGAAAA-CAATAACCCTCGAGGTTGAACCTTCCGATACGATCGAAAATGTAAAGGCTAAA 21073
Query 25262 ATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAA 25321
||| || || || ||||| || |||||||||||| | || || | || || |||||
Sbjct 21074 ATTCAAGACAAGGAAGGTATCCCACCCGATCAGCAACGTCTTATATTCGCTGGTAAACAG 21133
Query 25322 CTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTA 25381
| ||||| | | | | | | ||||| |||||||| |||||||||||| | || ||
Sbjct 21134 TTGGAAGACGGTCGTACTCTATCGGATTATAATATTCAGAAAGAATCCACCTTACACTTG 21193
Query 25382 GTGTTAAGATTGAGAGGAGG 25401
|| || | |||||||| ||
Sbjct 21194 GTATTGCGTTTGAGAGGCGG 21213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444947491029600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |