Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq9911 105 6e-18 >seq9911 Length=12084 Score = 105 bits (116), Expect = 6e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578 || || ||||||||||| | || ||| || ||||| |||||||| | | || || Sbjct 5993 AATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGATAGAGTGCGA 6052 Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638 | || |||| ||||| || ||||| ||||| ||||| || || | |||| | || Sbjct 6053 CCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGGGAATACCTTCT 6112 Query 35639 TTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTG 35698 |||||| |||||| || | | | | | ||||| | |||||| |||| || Sbjct 6113 TTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCCACTTCCAATGTA 6172 Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 || |||||||| || ||||| |||||||| ||||||||||| Sbjct 6173 ATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATTCT 6213 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || |||||||| | | |||||||||| ||| ||||||||||| |||||||| | Sbjct 4124 CCCCCACGTAAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAA 4183 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||||| | || |||| || || || ||||| ||||| |||||||| || | |||| Sbjct 4184 AGAGTTCGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGA 4243 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAG-TTGCCACCGTGTCGCTCGATTCCAC 35688 | | || || ||| ||| ||| |||| | | || | | || || | ||| || Sbjct 4244 ATACCTTCTTTATCC-TGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTAC 4302 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| ||||| || || | || || |||||||| ||||| Sbjct 4303 TTCCAATGTGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| || | ||| ||||| |||||||||| || || || |||||||| ||||| | Sbjct 4578 TTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAG 4637 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || || || | || |||| ||| ||||| ||||| || || ||||| || || | || Sbjct 4638 ATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAG 4697 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCC 35686 | | | || ||||| |||||| |||| | || | | || || | |||| Sbjct 4698 GTATTCCTTCTTTGTCTTGGATCTTA-GCTTTGGCATTCTCGATAGTATCAGAAGGTTCC 4756 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || |||| || || || || ||||| | |||||||||||| || ||||||| Sbjct 4757 ACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATTC 4808 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||| |||||||| | | || || | || |||| ||||| || |||||| Sbjct 4844 TCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAAT 4903 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| || || || || | ||| | | |||||||| |||||| |||| | || Sbjct 4904 ATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTT 4963 Query 35666 GCCACCGTGTC-GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || ||| | |||||| || | || || || ||||| || |||||||| || Sbjct 4964 TCTATGGTATCAGCT-GGTTCCACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAAC 5022 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 5023 AAAAATCTGCAT 5034 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| | | ||||||||| | ||| |||||||| || || || || | | Sbjct 5756 CCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCAGAC 5815 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || ||||| | || |||| ||||| || || || || || || || ||||| | || Sbjct 5816 AATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGG 5875 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACC-GTGTCGCTCGATTCCAC 35688 | || |||||||| ||| |||||||| ||| || || ||| | || || Sbjct 5876 ATGCCTTCCTTGTCT-TGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAAC 5934 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || ||||| || ||||| ||||||||||| || ||||| Sbjct 5935 TTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450644809937400