Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 105 6e-18
>seq9911
Length=12084
Score = 105 bits (116), Expect = 6e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578
|| || ||||||||||| | || ||| || ||||| |||||||| | | || ||
Sbjct 5993 AATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGATAGAGTGCGA 6052
Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638
| || |||| ||||| || ||||| ||||| ||||| || || | |||| | ||
Sbjct 6053 CCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGGGAATACCTTCT 6112
Query 35639 TTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTG 35698
|||||| |||||| || | | | | | ||||| | |||||| |||| ||
Sbjct 6113 TTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCCACTTCCAATGTA 6172
Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739
|| |||||||| || ||||| |||||||| |||||||||||
Sbjct 6173 ATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATTCT 6213
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| |||||||| | | |||||||||| ||| ||||||||||| |||||||| |
Sbjct 4124 CCCCCACGTAAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAA 4183
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||||| | || |||| || || || ||||| ||||| |||||||| || | ||||
Sbjct 4184 AGAGTTCGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGA 4243
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAG-TTGCCACCGTGTCGCTCGATTCCAC 35688
| | || || ||| ||| ||| |||| | | || | | || || | ||| ||
Sbjct 4244 ATACCTTCTTTATCC-TGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTAC 4302
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||||| ||||| || || | || || |||||||| |||||
Sbjct 4303 TTCCAATGTGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||| || | ||| ||||| |||||||||| || || || |||||||| ||||| |
Sbjct 4578 TTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAG 4637
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
|| || || | || |||| ||| ||||| ||||| || || ||||| || || | ||
Sbjct 4638 ATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAG 4697
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCC 35686
| | | || ||||| |||||| |||| | || | | || || | ||||
Sbjct 4698 GTATTCCTTCTTTGTCTTGGATCTTA-GCTTTGGCATTCTCGATAGTATCAGAAGGTTCC 4756
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| |||| || || || || ||||| | |||||||||||| || |||||||
Sbjct 4757 ACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATTC 4808
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||||||||| |||||||| | | || || | || |||| ||||| || ||||||
Sbjct 4844 TCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAAT 4903
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| || || || || | ||| | | |||||||| |||||| |||| | ||
Sbjct 4904 ATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTT 4963
Query 35666 GCCACCGTGTC-GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | || || ||| | |||||| || | || || || ||||| || |||||||| ||
Sbjct 4964 TCTATGGTATCAGCT-GGTTCCACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAAC 5022
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 5023 AAAAATCTGCAT 5034
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | ||| | | ||||||||| | ||| |||||||| || || || || | |
Sbjct 5756 CCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCAGAC 5815
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| ||||| | || |||| ||||| || || || || || || || ||||| | ||
Sbjct 5816 AATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGG 5875
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACC-GTGTCGCTCGATTCCAC 35688
| || |||||||| ||| |||||||| ||| || || ||| | || ||
Sbjct 5876 ATGCCTTCCTTGTCT-TGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAAC 5934
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || || ||||| || ||||| ||||||||||| || |||||
Sbjct 5935 TTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450644809937400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |