Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 331 7e-86
seq22639 109 4e-19
seq16017 95.1 1e-14
>seq1220
Length=9943
Score = 331 bits (366), Expect = 7e-86
Identities = 660/965 (68%), Gaps = 21/965 (2%)
Strand=Plus/Minus
Query 43679 CTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAA 43738
|||| ||||||||| | ||||| || || ||||| |||||| || || |||
Sbjct 8063 CTTAAAGAAAATCCCAAACGATTTGTTGTTTTCCCAATAGAATATCCCGATATTTGGGCT 8004
Query 43739 ATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGAC 43798
| |||||| |||| | || || ||||||||| | |||||||| ||||| ||| |||
Sbjct 8003 AAATACAAACAAGCCGAAGCCTCGTTTTGGACAACCGAAGAAGTAGATTTATCTAGAGAT 7944
Query 43799 TTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCG 43858
||| ||||||| | ||||| | || | ||||||||| | || |||||
Sbjct 7943 ATAGATCATTGGAATAAATTAACCGATGACGAGAGACATTTTATCAAATACGTCTTGGCA 7884
Query 43859 TTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAA 43918
||||| ||||| ||| || || || ||||||||| |||| || ||| |||||
Sbjct 7883 TTTTTCGCTGCATCCGATGGAATCGTTAATGAAAATCTGGTGGAACGTTTTAGTCAAGAG 7824
Query 43919 GTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCAT 43978
|||||| || | ||||| || |||||||| || ||||||||||| || || |||||||||
Sbjct 7823 GTTCAAGTAACTGAAGCCCGGTGTTTTTACGGTTTTCAAATTGCAATTGAGAATATTCAT 7764
Query 43979 TCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGA 44038
||||||||||| | || || || ||||| |||| || | | ||||| |
Sbjct 7763 AGCGAAATGTACAGCATGCTTATTGAAACGTATATCAGCGACCCGAAAGAGAAAGAATTT 7704
Query 44039 TTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAAC-ATAAAGCAGACTGGGCCCTTA 44096
|| || ||||||||||||||| |||| |||| || | | ||||| ||||||||||
Sbjct 7703 TTATTCAATGCGATAGAAACACTACCTTGCG--TAGCCAAAAAAGCTAACTGGGCCCTGC 7646
Query 44097 AATGGATAA--ATTCAA-ATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGG 44153
||||||| | | | || | | | || || || || | || || || || | || |
Sbjct 7645 AATGGATCAGCAGTAAAGAGGCGACCTTCGGTGAGCGTTTAGTAGCTTTCGCTGCAGTCG 7586
Query 44154 AAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGA 44213
|||| |||||||| || ||| ||||| | || |||||||| || || |||| | |
Sbjct 7585 AAGGAATTTTCTTCTCCGGAAGCTTTGCTTCAATTTTTTGGTTGAAAAAGAGAGGACTTA 7526
Query 44214 TGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATT 44273
|||| || | || || || ||||| |||||| || |||||||| || |||| || |
Sbjct 7525 TGCCGGGTCTAACTTTCTCCAATGAATTAATATCCCGCGATGAAGGATTGCATTATGAAT 7466
Query 44274 TTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAA--GACAATTAC 44331
|||||||||| ||| || ||| | | | | || || || | || |||
Sbjct 7465 TTGCTTGCTTATTATTTTCTTATATTGTA---CAAAAACCGTC--GAAATCTCGAATCGT 7411
Query 44332 AGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGT 44391
|||||| || || || || | || || ||||| ||| | || || || |||||
Sbjct 7410 CGATATTATTTGCGACGCGGTTGAAATCGAGCAAGAGTTTCTTACCGATGCCTTGCCTGT 7351
Query 44392 AAATTTAATAGGAATGAA-TGAACTTTTGATGAACCAATATATTGAATACATTGCAGATC 44450
| |||||||||||||| || | | | |||| || |||||||||| | || ||
Sbjct 7350 TAGCTTAATAGGAATGAACTGCAAATCT-ATGAGTCAGTATATTGAATTTGTCGCTGACA 7292
Query 44451 GTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTA 44510
| ||| | ||||| ||||| || ||| |||| | | || || ||||||||||
Sbjct 7291 GATTATTGAACGAACTAGGTTGTGAAAAAGTTTATAATTCAAGCAATCCATTTGATTTTA 7232
Query 44511 TGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATC 44570
|| | | || || ||| || ||||| ||||||||||||||| ||||||||||| |
Sbjct 7231 TGAATATCATATCCACGGAGGGTAAAACTAACTTTTTTGAAAAAAAAGTTGGAGAATACC 7172
Query 44571 AGCGAATGGGCGTCA----TGATAACAAGTGACAATAAATTTACTACGGATGAAGATTTC 44626
| | | ||||| | |||| | | || ||| ||| ||||| |||| || ||
Sbjct 7171 AAAAAGTAGGCGTTACAAGTGATGTCTTG-GATAATGTATTCACTACAGATGCTGACTTT 7113
Query 44627 TAATT 44631
|||||
Sbjct 7112 TAATT 7108
>seq22639
Length=125898
Score = 109 bits (120), Expect = 4e-19
Identities = 239/354 (68%), Gaps = 8/354 (2%)
Strand=Plus/Minus
Query 40854 GATAGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCA 40913
||||| || ||||||||||| || || |||| || ||||| | ||| |||| ||| ||
Sbjct 12848 GATAGAGAAGAAGGTGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCT 12789
Query 40914 AAATATGACACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTT 40973
| ||| | |||| | | |||||||| |||| || || ||||| || | ||
Sbjct 12788 GATTATACAAATATGCATGCCGATTATACTAATAGGGGGATAGATCAGTTGATGGAAGTG 12729
Query 40974 ATAGATACGATTA--AATCCGATCCC--GATAGCCGACGTATAATATTGTGCGCGTGGAA 41029
||| |||| || | |||| || | | ||||| ||| || || |||| || |||||
Sbjct 12728 ATAAATACAATAAGGAATC-GACCGCATGATAG---ACGCATCATTATGTGTGCATGGAA 12673
Query 41030 CCCAACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGT 41089
||| || ||| | ||||| | |||||||| |||| || || |||| ||
Sbjct 12672 TCCAGTTGATATACCTAAAATGGCTCTTCCACCTTGCCATTGCTTGGTACAATTTTTTGT 12613
Query 41090 TTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGT 41149
| ||| || | || || | || ||||||||||| | || ||||| || || ||
Sbjct 12612 TGCGAATAACGAGTTATCTTGCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGT 12553
Query 41150 CCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203
|||||||| || || || ||||| | | || || ||||| || ||| ||||
Sbjct 12552 ACCGTTTAATATTGCAAGCTATGCCTTATTAACCTACATGATCGCTCACATTAC 12499
>seq16017
Length=40586
Score = 95.1 bits (104), Expect = 1e-14
Identities = 111/149 (74%), Gaps = 6/149 (4%)
Strand=Plus/Plus
Query 19552 CACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTG----T 19607
|| |||||||| | || ||| | |||||||| || || ||||||||| | || |
Sbjct 4792 CATATTATAATTTTCGACGAAATCGACGCAATTTGCAAATCAAGAGGTTCCGTTGCCGGT 4851
Query 19608 AAA--TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAAC 19665
|| ||| || || || ||||||||||||||| | || || ||| | ||||| ||| |
Sbjct 4852 AACACTGGTGTCCACGATACTGTTGTCAATCAATTGCTATCTAAAATTGACGGCGTTGAA 4911
Query 19666 CAACTGAATAATATTTTAGTTATTGGCAT 19694
||||| || |||||||| |||||||| ||
Sbjct 4912 CAACTCAACAATATTTTGGTTATTGGTAT 4940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397328094312025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |