Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1220 331 7e-86 seq22639 109 4e-19 seq16017 95.1 1e-14 >seq1220 Length=9943 Score = 331 bits (366), Expect = 7e-86 Identities = 660/965 (68%), Gaps = 21/965 (2%) Strand=Plus/Minus Query 43679 CTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAA 43738 |||| ||||||||| | ||||| || || ||||| |||||| || || ||| Sbjct 8063 CTTAAAGAAAATCCCAAACGATTTGTTGTTTTCCCAATAGAATATCCCGATATTTGGGCT 8004 Query 43739 ATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGAC 43798 | |||||| |||| | || || ||||||||| | |||||||| ||||| ||| ||| Sbjct 8003 AAATACAAACAAGCCGAAGCCTCGTTTTGGACAACCGAAGAAGTAGATTTATCTAGAGAT 7944 Query 43799 TTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCG 43858 ||| ||||||| | ||||| | || | ||||||||| | || ||||| Sbjct 7943 ATAGATCATTGGAATAAATTAACCGATGACGAGAGACATTTTATCAAATACGTCTTGGCA 7884 Query 43859 TTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAA 43918 ||||| ||||| ||| || || || ||||||||| |||| || ||| ||||| Sbjct 7883 TTTTTCGCTGCATCCGATGGAATCGTTAATGAAAATCTGGTGGAACGTTTTAGTCAAGAG 7824 Query 43919 GTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCAT 43978 |||||| || | ||||| || |||||||| || ||||||||||| || || ||||||||| Sbjct 7823 GTTCAAGTAACTGAAGCCCGGTGTTTTTACGGTTTTCAAATTGCAATTGAGAATATTCAT 7764 Query 43979 TCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGA 44038 ||||||||||| | || || || ||||| |||| || | | ||||| | Sbjct 7763 AGCGAAATGTACAGCATGCTTATTGAAACGTATATCAGCGACCCGAAAGAGAAAGAATTT 7704 Query 44039 TTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAAC-ATAAAGCAGACTGGGCCCTTA 44096 || || ||||||||||||||| |||| |||| || | | ||||| |||||||||| Sbjct 7703 TTATTCAATGCGATAGAAACACTACCTTGCG--TAGCCAAAAAAGCTAACTGGGCCCTGC 7646 Query 44097 AATGGATAA--ATTCAA-ATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGG 44153 ||||||| | | | || | | | || || || || | || || || || | || | Sbjct 7645 AATGGATCAGCAGTAAAGAGGCGACCTTCGGTGAGCGTTTAGTAGCTTTCGCTGCAGTCG 7586 Query 44154 AAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGA 44213 |||| |||||||| || ||| ||||| | || |||||||| || || |||| | | Sbjct 7585 AAGGAATTTTCTTCTCCGGAAGCTTTGCTTCAATTTTTTGGTTGAAAAAGAGAGGACTTA 7526 Query 44214 TGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATT 44273 |||| || | || || || ||||| |||||| || |||||||| || |||| || | Sbjct 7525 TGCCGGGTCTAACTTTCTCCAATGAATTAATATCCCGCGATGAAGGATTGCATTATGAAT 7466 Query 44274 TTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAA--GACAATTAC 44331 |||||||||| ||| || ||| | | | | || || || | || ||| Sbjct 7465 TTGCTTGCTTATTATTTTCTTATATTGTA---CAAAAACCGTC--GAAATCTCGAATCGT 7411 Query 44332 AGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGT 44391 |||||| || || || || | || || ||||| ||| | || || || ||||| Sbjct 7410 CGATATTATTTGCGACGCGGTTGAAATCGAGCAAGAGTTTCTTACCGATGCCTTGCCTGT 7351 Query 44392 AAATTTAATAGGAATGAA-TGAACTTTTGATGAACCAATATATTGAATACATTGCAGATC 44450 | |||||||||||||| || | | | |||| || |||||||||| | || || Sbjct 7350 TAGCTTAATAGGAATGAACTGCAAATCT-ATGAGTCAGTATATTGAATTTGTCGCTGACA 7292 Query 44451 GTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTA 44510 | ||| | ||||| ||||| || ||| |||| | | || || |||||||||| Sbjct 7291 GATTATTGAACGAACTAGGTTGTGAAAAAGTTTATAATTCAAGCAATCCATTTGATTTTA 7232 Query 44511 TGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATC 44570 || | | || || ||| || ||||| ||||||||||||||| ||||||||||| | Sbjct 7231 TGAATATCATATCCACGGAGGGTAAAACTAACTTTTTTGAAAAAAAAGTTGGAGAATACC 7172 Query 44571 AGCGAATGGGCGTCA----TGATAACAAGTGACAATAAATTTACTACGGATGAAGATTTC 44626 | | | ||||| | |||| | | || ||| ||| ||||| |||| || || Sbjct 7171 AAAAAGTAGGCGTTACAAGTGATGTCTTG-GATAATGTATTCACTACAGATGCTGACTTT 7113 Query 44627 TAATT 44631 ||||| Sbjct 7112 TAATT 7108 >seq22639 Length=125898 Score = 109 bits (120), Expect = 4e-19 Identities = 239/354 (68%), Gaps = 8/354 (2%) Strand=Plus/Minus Query 40854 GATAGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCA 40913 ||||| || ||||||||||| || || |||| || ||||| | ||| |||| ||| || Sbjct 12848 GATAGAGAAGAAGGTGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCT 12789 Query 40914 AAATATGACACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTT 40973 | ||| | |||| | | |||||||| |||| || || ||||| || | || Sbjct 12788 GATTATACAAATATGCATGCCGATTATACTAATAGGGGGATAGATCAGTTGATGGAAGTG 12729 Query 40974 ATAGATACGATTA--AATCCGATCCC--GATAGCCGACGTATAATATTGTGCGCGTGGAA 41029 ||| |||| || | |||| || | | ||||| ||| || || |||| || ||||| Sbjct 12728 ATAAATACAATAAGGAATC-GACCGCATGATAG---ACGCATCATTATGTGTGCATGGAA 12673 Query 41030 CCCAACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGT 41089 ||| || ||| | ||||| | |||||||| |||| || || |||| || Sbjct 12672 TCCAGTTGATATACCTAAAATGGCTCTTCCACCTTGCCATTGCTTGGTACAATTTTTTGT 12613 Query 41090 TTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGT 41149 | ||| || | || || | || ||||||||||| | || ||||| || || || Sbjct 12612 TGCGAATAACGAGTTATCTTGCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGT 12553 Query 41150 CCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203 |||||||| || || || ||||| | | || || ||||| || ||| |||| Sbjct 12552 ACCGTTTAATATTGCAAGCTATGCCTTATTAACCTACATGATCGCTCACATTAC 12499 >seq16017 Length=40586 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Plus Query 19552 CACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTG----T 19607 || |||||||| | || ||| | |||||||| || || ||||||||| | || | Sbjct 4792 CATATTATAATTTTCGACGAAATCGACGCAATTTGCAAATCAAGAGGTTCCGTTGCCGGT 4851 Query 19608 AAA--TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAAC 19665 || ||| || || || ||||||||||||||| | || || ||| | ||||| ||| | Sbjct 4852 AACACTGGTGTCCACGATACTGTTGTCAATCAATTGCTATCTAAAATTGACGGCGTTGAA 4911 Query 19666 CAACTGAATAATATTTTAGTTATTGGCAT 19694 ||||| || |||||||| |||||||| || Sbjct 4912 CAACTCAACAATATTTTGGTTATTGGTAT 4940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397328094312025