Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq9764 168 6e-37 seq9911 109 5e-19 >seq9764 Length=88291 Score = 168 bits (186), Expect = 6e-37 Identities = 315/461 (68%), Gaps = 10/461 (2%) Strand=Plus/Plus Query 131042 CTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCT 131101 ||||| |||||||| | ||||| | || ||| ||| || ||||| ||| Sbjct 25052 CTAGCCTCCAAAGCGGCATAATACAACGTCTCGAAAATCTGCAAGTTTAACATGCGAGCT 25111 Query 131102 TGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCA 131161 | | ||| || || || | | ||| ||||||||||| || || || |||||||| || Sbjct 25112 TCCTCGCTATCATACGGCATTCTCAACAAAATAAAAGCATCGGCAAGGCCCTGTATTCCG 25171 Query 131162 ACGCCCACCGGTCTATGTTTTAAATT--ACATTTACGCGAACATTCGG---TGGGATAAA 131216 | || | |||||||||| | | ||| || ||| | ||||| | |||||| Sbjct 25172 ATACCGATCGGTCTATGTCTCATATTCGACGTTTTG-----CTTTCGGGTATCGGATAAT 25226 Query 131217 GGTTAATGTCAATTATTTTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATT 131276 ||||||||| || || ||||| || |||||| || |||| |||||| | ||||| | Sbjct 25227 AGTTAATGTCTATGATCTTGTTCAAGTTGCGCGTGACGATTTTCGTGACGTTCTTCAAGT 25286 Query 131277 TGTCGAAATCAAACGTGCCAGTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCA 131336 | |||||||| |||| | || | ||||| || ||| || || ||||| | Sbjct 25287 TTTCGAAATCGTACGTCTTCCTATCCGGTTTTACGAACATATTCACGGCAATCGACGCTA 25346 Query 131337 GATTACAAACTGCCGTTTCGTCATAATCGCAATACTGAACAATTTCGGCGCACAAATTAC 131396 ||||||||||||| ||||||| | ||||| || || |||| ||| || || | Sbjct 25347 GATTACAAACTGCAATTTCGTCTTTGGACGTATACTCTACGATCTCGGTGCATAAGTTGC 25406 Query 131397 TGCTCTTTATGGTGCCCAAATTTTGTTGATTGCTTTTAGCATTCACATGGTCCTTGTACA 131456 | || || || || |||| || ||||| ||||||||| ||| | ||||||||| | Sbjct 25407 TACTTTTGATCGTTCCCAGGTTCTGTTGGTTGCTTTTACGATTGCAAGCGTCCTTGTAGA 25466 Query 131457 TCATGTAGGGCGTGCCCGTTTCGACTTGAGTTTCAATAATG 131497 |||||| || || || ||||| ||||| | |||| ||| Sbjct 25467 GCATGTAAGGGGTACCGGTTTCCACTTGGGCGGCAATGATG 25507 Score = 102 bits (112), Expect = 7e-17 Identities = 219/323 (68%), Gaps = 11/323 (3%) Strand=Plus/Plus Query 131645 TCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTT 131704 || || || ||||||||||| || || | ||| | || || |||| ||| ||||| Sbjct 25816 TCGACGCGTTTCATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGC 25875 Query 131705 TTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAG 131764 ||||| | || || | || |||||||| || || ||||| || || || |||||| Sbjct 25876 GCTTCTTCGATGCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAG 25935 Query 131765 GGTTCCAAATACACTGCCATTGC-----GCCT-TTGCGCTTACCGCCTTGATTAACATGA 131818 || ||||| || | || | || |||| ||| || || ||||||| ||| | | Sbjct 25936 GGCTCCAAGTAAATGGCGAAAGCTCCCGGCCTCTTG---TTTCCACCTTGATCAACGTAA 25992 Query 131819 CGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTG 131878 || || | || ||| | || | | ||| ||| |||||||||||| || || ||| Sbjct 25993 CGCGCCGTATTATTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTG 26052 Query 131879 CTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCG 131938 | ||| || | || || ||||| || ||||| ||||| | || ||||| ||| | Sbjct 26053 CCGGCAATATAAGTTCCTTTCGCTCTTATATTGTGCACGTTTACGCCGATACCGCCGGCT 26112 Query 131939 TATTTAGAGAT-TAGTGCGCATT 131960 | || || || ||| ||||||| Sbjct 26113 GACTTCGAAATGTAG-GCGCATT 26134 Score = 102 bits (112), Expect = 7e-17 Identities = 168/239 (70%), Gaps = 5/239 (2%) Strand=Plus/Plus Query 130744 CAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCT 130803 || ||| | ||||| || || || || |||| || ||||||||| ||| ||||| Sbjct 27638 CAGATGGTGATTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGA 27697 Query 130804 CGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCAT 130863 ||| ||||||||||||||||||| || || || ||||| || || | || || ||||| Sbjct 27698 AGTGTACGGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCAT 27757 Query 130864 GTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGC-TTCAATTCAT 130922 ||| | | || |||||| | | ||| || | | || | ||||| || ||| | Sbjct 27758 AGGTGCTAGAAGTAAAGAATTTCTTACACCATGTTTAGCGA-TCTTCGCTTTTAATGCGC 27816 Query 130923 CCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCT 130981 ||||||||||||| || || | || |||||||||||| |||||| || ||| Sbjct 27817 TCCAATCCCATAGATCTGTTGGCGTTAC---GTTCCACATATCGTATTGTAAAATACCT 27872 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/229 (70%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 130754 TTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGT 130813 |||| || || || || |||| || ||||||||| ||| ||||| ||| ||||| Sbjct 24512 TTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGT 24571 Query 130814 TCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACT 130873 |||||||||||||| || || || ||||| || || | || || ||||| ||| | Sbjct 24572 TCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGA 24631 Query 130874 AATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGC-TTCAATTCATCCCAATCCCA 130932 | || |||||| | | ||| || | | || | ||||| || ||| | ||||||||| Sbjct 24632 AGTAAAGAATTTCTTACACCATGTTTAGCGA-TCTTCGCTTTTAATGCGCTCCAATCCCA 24690 Query 130933 TAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCT 130981 |||| || || | || |||||||||||| |||||| || ||| Sbjct 24691 TAGATTTGTTGGCGTTAC---GTTCCACATATCGTATTGTAAAATACCT 24736 >seq9911 Length=12084 Score = 109 bits (120), Expect = 5e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || || || || | ||||||||||| ||||| || |||||||||||||| || Sbjct 4123 GCCCCCACGTAAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGA 4182 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | ||| | ||||| | ||||| || || | || | |||||| ||||| || || Sbjct 4183 AAGAGTTCGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGG 4242 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| |||||||| || || ||| | | |||| | || |||| | ||| || Sbjct 4243 AATACCTTCTTTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTAC 4302 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 ||| | || |||| ||| || || || || || ||||| ||||||||| || || Sbjct 4303 TTCCAATGTGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCATACCTCCT 4357 Score = 109 bits (120), Expect = 5e-19 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 ||||| | || | |||||||||||||| || || ||||| ||||| || || || | | Sbjct 4580 CCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGAT 4639 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | || || | ||||| | ||||||||| || |||| | |||||||||||| || || Sbjct 4640 AAAGTA-CGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGG 4698 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT--ACAGTGTCTGTGGCTTCA 27197 | || ||||| || |||||| ||| || |||| | ||| || | | ||| Sbjct 4699 TATTCCTTCTTTGTCTTGGATCTTAGCTTT--GGCATTCTCGATAGTATCAGAAGGTTCC 4756 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| | || || | || ||||| |||||||||||||| |||||||| Sbjct 4757 ACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCAT 4806 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| || ||||| ||||| | ||||| || ||||| || || || || Sbjct 5036 CCACCCCTCAATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAA 5095 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||| | |||||||| ||| | || || || |||||||| || || Sbjct 5096 AGGGTACGACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGA 5155 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| |||||||| |||||| ||| | |||| | || || | | ||||||| Sbjct 5156 ATACCTTCTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAACT 5215 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| ||| || | || || || | |||||| ||||| ||||||||| Sbjct 5216 TCTAAAGTGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCATA 5263 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| ||||| || || || | ||||| |||||||| ||||| || || Sbjct 4352 CCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGAA 4411 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || || | ||||| ||||| |||| | ||| || || || || || Sbjct 4412 AGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGT 4471 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| ||||| || ||| || ||| | | |||| | ||||| | | ||| ||| Sbjct 4472 ATACCTTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACT 4531 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| || || | ||| || || |||||||| |||||||||||||| Sbjct 4532 TCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCAT 4578 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| | || |||||||| | || || ||||| ||||||||||| || Sbjct 5984 CCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAT 6043 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| | || || ||||| | || | ||||||||||| || || Sbjct 6044 AGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGGGA 6103 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| ||||| || |||||| ||| | | || | ||||||| | ||| ||| Sbjct 6104 ATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCCACT 6163 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || || | ||| || || | ||| ||||||||||| ||||| Sbjct 6164 TCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCAT 6210 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | |||||| ||||||| || | || || || |||||||||||||| || Sbjct 4808 CCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGAT 4867 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| | || || || || | || | ||| |||||||| || || Sbjct 4868 AGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGGG 4927 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||| ||||| |||||| || || | | ||| ||| Sbjct 4928 ATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCCACT 4987 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || |||| || || || | |||||| ||||| || |||||| Sbjct 4988 TCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCATA 5035 Score = 82.4 bits (90), Expect = 6e-11 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCA-TGTTGCGCTCGTCTTC 27097 |||||||| | ||||| || ||||| ||||| ||||| || |||| || | ||||| Sbjct 5774 ACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGC-CATCTTC 5832 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | || || || ||| | || | ||| ||||| || || || | || || || || Sbjct 5833 CAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTG 5892 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTTATAGATT 27216 || || ||| | | |||| | || || | ||||| ||||||| | || || | || Sbjct 5893 AATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCT-CAACTTCCAATGTAATGGTTT 5951 Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 | || |||| ||||||||||| ||||||||| || || Sbjct 5952 TTCCAGTCAAGGTTTTCACAAAAATTTGCATACCTCCT 5989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424797651462360