Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq9764 95.1 1e-14 >seq9764 Length=88291 Score = 95.1 bits (104), Expect = 1e-14 Identities = 214/318 (67%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 117945 TGATCGATG-AAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTC 118003 ||||||||| ||||| || ||||| ||||| | ||| | | |||| | |||||| Sbjct 27450 TGATCGATGAAAGCG-CCACGATCGGCCGCTTGGTTAATAATAACCTTATTAGAGATTTC 27508 Query 118004 CCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGA 118063 ||| || || |||||| ||||| |||||||| || || || ||||| || || || Sbjct 27509 CCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGAATATTCTGTATCGA 27568 Query 118064 TCCACCCGCCTTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTT 118120 |||| ||| | | || ||| |||||| || | ||||||| | | | | Sbjct 27569 ACCAC---AATTGGCGAGGATCTGATTCTTCATGTCGTCGTCCCAGAGATCTCTATCGGT 27625 Query 118121 GAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAG 118180 ||||| || ||||| | ||| || || || || || | | | |||||| Sbjct 27626 AAGATCGCGCAACAGATGGTGATTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGGT 27685 Query 118181 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 118240 ||||| || | ||||| || |||||| | || || || || |||||||| || || || Sbjct 27686 GTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCGA 27745 Query 118241 GGCTGTGGGCATGGGTGC 118258 ||||| ||||| ||||| Sbjct 27746 AGCTGTCGGCATAGGTGC 27763 Score = 89.7 bits (98), Expect = 6e-13 Identities = 213/318 (67%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 117945 TGATCGATG-AAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTC 118003 ||||||||| ||||| || ||||| ||||| | ||| | | |||| | |||||| Sbjct 24314 TGATCGATGAAAGCG-CCACGATCGGCCGCTTGGTTAATAATAACCTTATTAGAGATTTC 24372 Query 118004 CCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGA 118063 ||| || || |||||| ||||| |||||||| || || || ||||| || || || Sbjct 24373 CCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGAATATTCTGTATCGA 24432 Query 118064 TCCACCCGCCTTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTT 118120 |||| ||| | | || ||| |||||| || | ||||||| | | | | Sbjct 24433 ACCAC---AATTGGCGAGGATCTGATTCTTCATGTCGTCGTCCCAGAGATCTCTATCGGT 24489 Query 118121 GAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAG 118180 ||||| || ||||| | || || || || || || | | | |||||| Sbjct 24490 AAGATCGCGCAACAGATGGTGGTTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGGT 24549 Query 118181 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 118240 ||||| || | ||||| || |||||| | || || || || |||||||| || || || Sbjct 24550 GTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCGA 24609 Query 118241 GGCTGTGGGCATGGGTGC 118258 ||||| ||||| ||||| Sbjct 24610 AGCTGTCGGCATAGGTGC 24627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618231077731800