Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq22639 111 1e-19 >seq22639 Length=125898 Score = 111 bits (122), Expect = 1e-19 Identities = 395/599 (66%), Gaps = 30/599 (5%) Strand=Plus/Plus Query 111775 AAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGC 111834 |||||||| ||||| || |||||||| || | || || || ||||| ||||| || Sbjct 12493 AAACCAGTAATGTGAGCGATCATGTAGGTTAATAAGGCATAGCTTGCAATATTAAACGGT 12552 Query 111835 ACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGAC 111894 || || || |||||||| | ||||||||||||| | || |||| | || | | Sbjct 12553 ACTCCAAGACCCATATCGGCAGATCTTTGATATAAAAGGCAAGATAACTCGTTATTCGCA 12612 Query 111895 ACATAAAATTG-ACAAAGTACATGACAAGGAGGCAATGCCATCCCATTCAT---AAAGGG 111950 ||| ||||||| || ||| | ||| ||||| || | ||||| | || || || Sbjct 12613 ACAAAAAATTGTACCAAGCA-ATGGCAAGGTGGAAGAGCCATTTTAGGTATATCAACTGG 12671 Query 111951 TCCCCATGCACACATGATCATCCTTC-----TGCTGTAGCGATTATGTTCAATGTCGTGT 112005 |||||||||||| || || | || ||| || |||| | | | ||| | | Sbjct 12672 ATTCCATGCACACATAATGATGCGTCTATCATGCGGT--CGAT--TCCTTATTGT-ATTT 12726 Query 112006 ATGACATTCAAGAGCTGGTCTATCCCTTTACCAGTATAATCCGCCTGACATCCAGTGTAT 112065 || || | || | ||| |||||||| || ||||||||| || || ||| ||||| Sbjct 12727 ATCACTTCCATCAACTGATCTATCCCCCTATTAGTATAATCGGCATG-CAT-ATTTGTAT 12784 Query 112066 GTT--GCCCCATAGTGTCTCCATTGGAATCCATAAATAGGCCCCAGATCTCCCGGGGCTG 112123 | |||||||| || | |||||| || || ||||| || || ||||| || || Sbjct 12785 AATCAGCCCCATAATGGCGCCATTGAAAGCCGTAAATTGGTCCTAGATCACCTTCTTCTC 12844 Query 112124 TATCTGGAAATTGCTCTCTATTCAACAAATCACTTCTAATATGAGGATTCCAAATCTTCA 112183 |||| || | || || ||||||| || ||| | ||||| || || | Sbjct 12845 TATCGATTAAACCAACAGAATCTAAGAAATCACGAGTACTATTTGCTTTCCATATATTGA 12904 Query 112184 C--TCCTTTAGATGATAACTCTCTTGCATTTGTGGATCCTCTAATAAACCATAGCAATTC 112241 | || ||| | | | || | | ||| || ||| ||| |||| |||||||| ||||| Sbjct 12905 CGTTCTTTTCGCTCA-AAATAT-GTGCGTTAGTGCTTCCCTTAATGAACCATAGTAATTC 12962 Query 112242 TTCCACAACCCCTTTCCAG--TACACTCTTTTAGTAGTTAGCA-GTGGA--AAAGAATCA 112296 || || || ||| ||||| ||||| |||| ||||| | | | ||| | | || Sbjct 12963 CTCAACGACGCCTCTCCAGAATACACGCTTT--GTAGTCAAAACGGGGATTATATTGTCT 13020 Query 112297 TGTAGGGAGAATCTTAGTTGTGGACCAAACAAAGACAATGTTCCTACTCCAGTTCTATC 112355 |||| || | || | ||| | ||||| | || ||||||| |||||||| | ||| Sbjct 13021 CGTAGAGAATACCTCATTTGCGCGCCAAAAATAGCATATGTTCCAACTCCAGTACGATC 13079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391819467619015