Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq22639 111 1e-19
>seq22639
Length=125898
Score = 111 bits (122), Expect = 1e-19
Identities = 395/599 (66%), Gaps = 30/599 (5%)
Strand=Plus/Plus
Query 111775 AAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGC 111834
|||||||| ||||| || |||||||| || | || || || ||||| ||||| ||
Sbjct 12493 AAACCAGTAATGTGAGCGATCATGTAGGTTAATAAGGCATAGCTTGCAATATTAAACGGT 12552
Query 111835 ACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGAC 111894
|| || || |||||||| | ||||||||||||| | || |||| | || | |
Sbjct 12553 ACTCCAAGACCCATATCGGCAGATCTTTGATATAAAAGGCAAGATAACTCGTTATTCGCA 12612
Query 111895 ACATAAAATTG-ACAAAGTACATGACAAGGAGGCAATGCCATCCCATTCAT---AAAGGG 111950
||| ||||||| || ||| | ||| ||||| || | ||||| | || || ||
Sbjct 12613 ACAAAAAATTGTACCAAGCA-ATGGCAAGGTGGAAGAGCCATTTTAGGTATATCAACTGG 12671
Query 111951 TCCCCATGCACACATGATCATCCTTC-----TGCTGTAGCGATTATGTTCAATGTCGTGT 112005
|||||||||||| || || | || ||| || |||| | | | ||| | |
Sbjct 12672 ATTCCATGCACACATAATGATGCGTCTATCATGCGGT--CGAT--TCCTTATTGT-ATTT 12726
Query 112006 ATGACATTCAAGAGCTGGTCTATCCCTTTACCAGTATAATCCGCCTGACATCCAGTGTAT 112065
|| || | || | ||| |||||||| || ||||||||| || || ||| |||||
Sbjct 12727 ATCACTTCCATCAACTGATCTATCCCCCTATTAGTATAATCGGCATG-CAT-ATTTGTAT 12784
Query 112066 GTT--GCCCCATAGTGTCTCCATTGGAATCCATAAATAGGCCCCAGATCTCCCGGGGCTG 112123
| |||||||| || | |||||| || || ||||| || || ||||| || ||
Sbjct 12785 AATCAGCCCCATAATGGCGCCATTGAAAGCCGTAAATTGGTCCTAGATCACCTTCTTCTC 12844
Query 112124 TATCTGGAAATTGCTCTCTATTCAACAAATCACTTCTAATATGAGGATTCCAAATCTTCA 112183
|||| || | || || ||||||| || ||| | ||||| || || |
Sbjct 12845 TATCGATTAAACCAACAGAATCTAAGAAATCACGAGTACTATTTGCTTTCCATATATTGA 12904
Query 112184 C--TCCTTTAGATGATAACTCTCTTGCATTTGTGGATCCTCTAATAAACCATAGCAATTC 112241
| || ||| | | | || | | ||| || ||| ||| |||| |||||||| |||||
Sbjct 12905 CGTTCTTTTCGCTCA-AAATAT-GTGCGTTAGTGCTTCCCTTAATGAACCATAGTAATTC 12962
Query 112242 TTCCACAACCCCTTTCCAG--TACACTCTTTTAGTAGTTAGCA-GTGGA--AAAGAATCA 112296
|| || || ||| ||||| ||||| |||| ||||| | | | ||| | | ||
Sbjct 12963 CTCAACGACGCCTCTCCAGAATACACGCTTT--GTAGTCAAAACGGGGATTATATTGTCT 13020
Query 112297 TGTAGGGAGAATCTTAGTTGTGGACCAAACAAAGACAATGTTCCTACTCCAGTTCTATC 112355
|||| || | || | ||| | ||||| | || ||||||| |||||||| | |||
Sbjct 13021 CGTAGAGAATACCTCATTTGCGCGCCAAAAATAGCATATGTTCCAACTCCAGTACGATC 13079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391819467619015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |