Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq9764 98.7 1e-15 >seq9764 Length=88291 Score = 98.7 bits (108), Expect = 1e-15 Identities = 235/349 (67%), Gaps = 5/349 (1%) Strand=Plus/Plus Query 79462 TCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTG 79521 || ||||| |||| ||| ||||||||||| ||||||| || |||||||| | ||| Sbjct 25907 TCAAGAAA-TCCAAGATATCGGCGTGCCAGGGCTCCAAGTAAATGGCGAAAGCTCCCGGC 25965 Query 79522 CGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGC 79581 | |||| || || || | ||||| || ||||| || |||||||| | ||||| ||| Sbjct 25966 CTCTTGTTTCCACCTTGATCAACGTAACGCGCCGTATTATTGAAAACCCTTAGCATCGGC 26025 Query 79582 ACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTC 79641 || | |||| || ||||||||||| ||| || || || |||| | || || Sbjct 26026 ACCAAACCGTTGGATACGCCGTTCGTGCCGGCAATATAAGTTCCTTTCGCTCTTATATT- 26084 Query 79642 GAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACT-CCTTGAGCG 79699 | ||| || | ||||| || |||| |||| || |||| ||||| | | ||| Sbjct 26085 GTGCACGTTTACGCCGATACCGCCGGCTGACTTCGAAATGTAGGCGCATTGCGCCAAGCA 26144 Query 79700 TCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCT 79759 | | | || |||||||||||||| || ||| | |||||||| || | || Sbjct 26145 GGT-GAAAATCCCCTCGATCGAGTCTTCGGGCATCATCAAGAGGAAGCATGAAGAAAGCT 26203 Query 79760 GTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAA 79808 | || || ||| | || ||| || ||||| | |||||||| || Sbjct 26204 GAGGTTTTGGTGTAGCCGCCGAGAACAGAGTCGGACTAGCGTGCGTAAA 26252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548343752533200