Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq9764 89.7 6e-13 >seq9764 Length=88291 Score = 89.7 bits (98), Expect = 6e-13 Identities = 235/352 (67%), Gaps = 5/352 (1%) Strand=Plus/Minus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 || ||||||||||| | || || |||||| || | ||| | |||||| | || Sbjct 26255 TATTTTACGCACGCTAGTCCGACTCTGTTCTCGGCGGCTACACCAAAACCTCAGCTTTCT 26196 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 |||||||| || |||| || ||||||||||| || || | | | ||| Sbjct 26195 TCATGCTTCCTCTTGATGATGCCCGAAGACTCGATCGAGGGGATTTTC-ACCTGCTTGGC 26137 Query 53390 G-AGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCC 53447 | | || ||| |||| || |||| | || |||||||| | || ||| | || | Sbjct 26136 GCAATGCGCCTACATTTCGAAGTCAGCCGGCGGTATCGGCGTAAACGTGCAC-AATATAA 26078 Query 53448 GTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGC 53507 | ||||| || || || || ||||||||||| || | || | ||||| |||| Sbjct 26077 GAGCGAAAGGAACTTATATTGCCGGCACGAACGGCGTATCCAACGGTTTGGTGCCGATGC 26018 Query 53508 TCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGT 53567 | | || ||||| || ||||| || ||||| | || ||||| ||| | ||| Sbjct 26017 TAAGGGTTTTCAATAATACGGCGCGTTACGTTGATCAAGGTGGAAACAAGAGGCCGGGAG 25958 Query 53568 CGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGA 53619 | |||||||| ||| | ||||| ||||||||||| || |||| ||||| || Sbjct 25957 CTTTCGCCATTTACTTGGAGCCCTGGCACGCCGATATCTTGGA-TTTCTTGA 25907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547035384519000