Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 167 3e-36
seq22504 152 6e-32
>seq9911
Length=12084
Score = 167 bits (184), Expect = 3e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || | || || ||||||||||| ||||| || || ||| |
Sbjct 5034 ATGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAACCAGCT 4975
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | |||| |||| || || ||||| |||||||| ||||| ||||| || ||
Sbjct 4974 GATACCATAGAAAATGTGAAAGCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGATCAA 4915
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| | || |||||||| |||||| | || |||| ||| || ||| |||| || |||
Sbjct 4914 CAACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAAT 4855
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620
| ||||||||||| |||||||| || || || ||
Sbjct 4854 ATTCAAAAGGAATCAACTCTTCACCTGGTATTACG 4820
Score = 158 bits (174), Expect = 1e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || | || || ||||| || ||| | || ||||| || |
Sbjct 5262 ATGCAAATTTTTGTTAAAACTTTAACTGGAAAGACCATCACTTTAGAAGTTGAACCATCT 5203
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| |||| | || ||||| || ||||| || || || ||||| || || ||
Sbjct 5202 GATACCATTGAAAATGTAAAAGCTAAGATCCAGGATAAAGAAGGTATTCCACCTGATCAA 5143
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || ||||| || |||||||| ||| | || |||| ||||||||| |||| |||||
Sbjct 5142 CAACGACTAATATTCGCTGGTAAACAATTAGAAGATGGTCGTACCCTTTCAGATTATAAC 5083
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620
||||||||||||| || |||||| |||| || ||
Sbjct 5082 ATCCAAAAGGAATCTACCCTTCATTTAGTATTACG 5048
Score = 150 bits (166), Expect = 2e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||||||||| || || ||||| || || || ||||| | || || || ||
Sbjct 4579 AATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAACCATC 4520
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||||| ||| | || || ||||| || ||||| || || || |||||||||||
Sbjct 4519 GGACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACCA 4460
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||| ||| | |||||||| || || ||| | ||||||| || || || |||| |||||
Sbjct 4459 GCAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCAGATTATAA 4400
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620
| ||||||| ||||| || || || ||||||||||
Sbjct 4399 TATCCAAAAAGAATCTACACTGCACTTAGTCTTGCG 4364
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || | || || || || ||||| | || |||||| ||
Sbjct 5718 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5659
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| | || || |||||||| |||||||| || || || ||||||||
Sbjct 5658 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5599
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| |||| || ||||| |||||| | || |||| ||||| | | ||||| |||
Sbjct 5598 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGTACATTGTCTGACTACAAT 5539
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||||||||| ||||| ||| | || | ||| | | |||||
Sbjct 5538 ATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGG 5492
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || | || || || || ||||| | || |||||| ||
Sbjct 5982 ATGCAAATTTTTGTGAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5923
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| | || || |||||||| |||||||| || || || ||||||||
Sbjct 5922 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5863
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| |||| || ||||| |||||| | || |||| || || | | |||||||||
Sbjct 5862 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACATTGTCTGACTATAAT 5803
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||||||||| ||||| ||| | || | ||| | | |||||
Sbjct 5802 ATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGG 5756
Score = 138 bits (152), Expect = 1e-27
Identities = 159/214 (74%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||| || || ||||| || ||||| ||||| | || || || |
Sbjct 4807 AATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTC 4748
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| || | ||| || ||||| || || ||||| || ||||| |||||||| ||
Sbjct 4747 TGATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCA 4688
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| |||||||||||||||| || | || |||| |||||| || | || |||||
Sbjct 4687 ACAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAA 4628
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| || || ||||||||||| ||| | || |||
Sbjct 4627 CATTCAGAAAGAATCCACTCTACATTTGGTATTG 4594
Score = 134 bits (148), Expect = 2e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| ||||| ||||| || || ||||| || | || || || |
Sbjct 4350 ATGCAAATATTTGTTAAGACCCTTACTGGGAAAACTATCACATTGGAAGTAGAACCTTCA 4291
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| | || |||||||||||||| || || || ||||||||||| |||
Sbjct 4290 GATACAATTGAAAACGTTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCTCCAGATCAG 4231
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || ||||| || || ||| | || |||| || || || |||| || |||
Sbjct 4230 CAGCGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGGCGAACTCTTTCAGATTACAAT 4171
Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609
| ||||||||||| || || |||
Sbjct 4170 ATTCAAAAGGAATCTACCCTACAT 4147
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | || || ||||| |||||| | || || ||| || |
Sbjct 5490 ATGCAGATATTCGTCAAGACATTAACTGGGAAGACGATTACTTTGGAAGTGGAGCCATCT 5431
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| |||| | || || |||||||| || || || || || || ||||||||
Sbjct 5430 GATACTATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAA 5371
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| | || ||||||||||| ||| | || |||| ||||| || | || |||||
Sbjct 5370 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAAC 5311
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620
||||||| || || || || ||| | || || ||
Sbjct 5310 ATCCAAAAAGAGTCGACCCTCCATTTGGTATTACG 5276
>seq22504
Length=90246
Score = 152 bits (168), Expect = 6e-32
Identities = 173/232 (75%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 27401 CTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460
||| ||||||||| || || || || ||||| || || || || || || ||||||||
Sbjct 25527 CTACAATGCAAATTTTCGTGAAAACACTTACAGGGAAAACAATAACCCTCGAGGTTGAAC 25586
Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520
| |||| || | |||| | |||||||||||||| |||||||| || || || || |
Sbjct 25587 CTTCCGATACGATCGAAAATGTAAAGGCTAAAATTCAAGACAAGGAAGGTATCCCACCCG 25646
Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580
| ||||| ||||| || || |||||||| || | || || | |||||| ||| | || |
Sbjct 25647 ATCAGCAACGTCTTATATTCGCTGGTAAACAGTTGGAAGACGGTCGTACTCTATCGGATT 25706
Query 27581 ATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||| |||| |||||||||||| | || | || |||||| | | |||||
Sbjct 25707 ATAATATCCAGAAGGAATCCACTTTGCACTTGGTGTTGCGTTTGAGGGGTGG 25758
Score = 113 bits (124), Expect = 5e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| || || || || || || |||||||| | |||| || | |||| | ||||||
Sbjct 21011 ACAGGGAAAACAATAACCCTCGAGGTTGAACCTTCCGATACGATCGAAAATGTAAAGGCT 21070
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|||||||| |||||||| || || || || || ||||| ||||| || || ||||||||
Sbjct 21071 AAAATTCAAGACAAGGAAGGTATCCCACCCGATCAGCAACGTCTTATATTCGCTGGTAAA 21130
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| | || || | |||||| ||| | || |||||| | || || |||||||| | ||
Sbjct 21131 CAGTTGGAAGACGGTCGTACTCTATCGGATTATAATATTCAGAAAGAATCCACCTTACAC 21190
Query 27610 CTAGTCTTGCGT 27621
| || ||||||
Sbjct 21191 TTGGTATTGCGT 21202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570122161923600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |