Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq9911 167 3e-36 seq22504 152 6e-32 >seq9911 Length=12084 Score = 167 bits (184), Expect = 3e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || | || || ||||||||||| ||||| || || ||| | Sbjct 5034 ATGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAACCAGCT 4975 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | |||| |||| || || ||||| |||||||| ||||| ||||| || || Sbjct 4974 GATACCATAGAAAATGTGAAAGCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGATCAA 4915 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || |||||||| |||||| | || |||| ||| || ||| |||| || ||| Sbjct 4914 CAACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAAT 4855 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620 | ||||||||||| |||||||| || || || || Sbjct 4854 ATTCAAAAGGAATCAACTCTTCACCTGGTATTACG 4820 Score = 158 bits (174), Expect = 1e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || || ||||| || ||| | || ||||| || | Sbjct 5262 ATGCAAATTTTTGTTAAAACTTTAACTGGAAAGACCATCACTTTAGAAGTTGAACCATCT 5203 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| |||| | || ||||| || ||||| || || || ||||| || || || Sbjct 5202 GATACCATTGAAAATGTAAAAGCTAAGATCCAGGATAAAGAAGGTATTCCACCTGATCAA 5143 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || ||||| || |||||||| ||| | || |||| ||||||||| |||| ||||| Sbjct 5142 CAACGACTAATATTCGCTGGTAAACAATTAGAAGATGGTCGTACCCTTTCAGATTATAAC 5083 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620 ||||||||||||| || |||||| |||| || || Sbjct 5082 ATCCAAAAGGAATCTACCCTTCATTTAGTATTACG 5048 Score = 150 bits (166), Expect = 2e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| || || ||||| || || || ||||| | || || || || Sbjct 4579 AATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAACCATC 4520 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| | || || ||||| || ||||| || || || ||||||||||| Sbjct 4519 GGACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACCA 4460 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||| | |||||||| || || ||| | ||||||| || || || |||| ||||| Sbjct 4459 GCAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCAGATTATAA 4400 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620 | ||||||| ||||| || || || |||||||||| Sbjct 4399 TATCCAAAAAGAATCTACACTGCACTTAGTCTTGCG 4364 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || || || || ||||| | || |||||| || Sbjct 5718 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5659 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || || |||||||| |||||||| || || || |||||||| Sbjct 5658 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5599 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| |||| || ||||| |||||| | || |||| ||||| | | ||||| ||| Sbjct 5598 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGTACATTGTCTGACTACAAT 5539 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| ||||| ||| | || | ||| | | ||||| Sbjct 5538 ATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGG 5492 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || || || || ||||| | || |||||| || Sbjct 5982 ATGCAAATTTTTGTGAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5923 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || || |||||||| |||||||| || || || |||||||| Sbjct 5922 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5863 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| |||| || ||||| |||||| | || |||| || || | | ||||||||| Sbjct 5862 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACATTGTCTGACTATAAT 5803 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| ||||| ||| | || | ||| | | ||||| Sbjct 5802 ATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGG 5756 Score = 138 bits (152), Expect = 1e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || ||||| || ||||| ||||| | || || || | Sbjct 4807 AATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTC 4748 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | ||| || ||||| || || ||||| || ||||| |||||||| || Sbjct 4747 TGATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCA 4688 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| |||||||||||||||| || | || |||| |||||| || | || ||||| Sbjct 4687 ACAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAA 4628 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | || || ||||||||||| ||| | || ||| Sbjct 4627 CATTCAGAAAGAATCCACTCTACATTTGGTATTG 4594 Score = 134 bits (148), Expect = 2e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| ||||| || || ||||| || | || || || | Sbjct 4350 ATGCAAATATTTGTTAAGACCCTTACTGGGAAAACTATCACATTGGAAGTAGAACCTTCA 4291 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || |||||||||||||| || || || ||||||||||| ||| Sbjct 4290 GATACAATTGAAAACGTTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCTCCAGATCAG 4231 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || ||||| || || ||| | || |||| || || || |||| || ||| Sbjct 4230 CAGCGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGGCGAACTCTTTCAGATTACAAT 4171 Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609 | ||||||||||| || || ||| Sbjct 4170 ATTCAAAAGGAATCTACCCTACAT 4147 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | || || ||||| |||||| | || || ||| || | Sbjct 5490 ATGCAGATATTCGTCAAGACATTAACTGGGAAGACGATTACTTTGGAAGTGGAGCCATCT 5431 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | || || |||||||| || || || || || || |||||||| Sbjct 5430 GATACTATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAA 5371 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || ||||||||||| ||| | || |||| ||||| || | || ||||| Sbjct 5370 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAAC 5311 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620 ||||||| || || || || ||| | || || || Sbjct 5310 ATCCAAAAAGAGTCGACCCTCCATTTGGTATTACG 5276 >seq22504 Length=90246 Score = 152 bits (168), Expect = 6e-32 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 27401 CTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460 ||| ||||||||| || || || || ||||| || || || || || || |||||||| Sbjct 25527 CTACAATGCAAATTTTCGTGAAAACACTTACAGGGAAAACAATAACCCTCGAGGTTGAAC 25586 Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520 | |||| || | |||| | |||||||||||||| |||||||| || || || || | Sbjct 25587 CTTCCGATACGATCGAAAATGTAAAGGCTAAAATTCAAGACAAGGAAGGTATCCCACCCG 25646 Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 | ||||| ||||| || || |||||||| || | || || | |||||| ||| | || | Sbjct 25647 ATCAGCAACGTCTTATATTCGCTGGTAAACAGTTGGAAGACGGTCGTACTCTATCGGATT 25706 Query 27581 ATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| |||| |||||||||||| | || | || |||||| | | ||||| Sbjct 25707 ATAATATCCAGAAGGAATCCACTTTGCACTTGGTGTTGCGTTTGAGGGGTGG 25758 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || || || || || || || |||||||| | |||| || | |||| | |||||| Sbjct 21011 ACAGGGAAAACAATAACCCTCGAGGTTGAACCTTCCGATACGATCGAAAATGTAAAGGCT 21070 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 |||||||| |||||||| || || || || || ||||| ||||| || || |||||||| Sbjct 21071 AAAATTCAAGACAAGGAAGGTATCCCACCCGATCAGCAACGTCTTATATTCGCTGGTAAA 21130 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || | || || | |||||| ||| | || |||||| | || || |||||||| | || Sbjct 21131 CAGTTGGAAGACGGTCGTACTCTATCGGATTATAATATTCAGAAAGAATCCACCTTACAC 21190 Query 27610 CTAGTCTTGCGT 27621 | || |||||| Sbjct 21191 TTGGTATTGCGT 21202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570122161923600