Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq9911 163 2e-35 seq22504 149 5e-31 seq2360 84.2 2e-11 seq1409 84.2 2e-11 >seq9911 Length=12084 Score = 163 bits (180), Expect = 2e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||| | || || ||| ||||||| |||||||||||||| | Sbjct 5034 ATGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAACCAGCT 4975 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || ||| ||| ||||||||||| ||||| || || ||||||||| Sbjct 4974 GATACCATAGAAAATGTGAAAGCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGATCAA 4915 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| |||| || ||||| ||||||||||| || || | || |||||||| Sbjct 4914 CAACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAAT 4855 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| || || | || |||| || || ||| | || || || Sbjct 4854 ATTCAAAAGGAATCAACTCTTCACCTGGTATTACGGTTGAGAGGAGGAAT 4805 Score = 163 bits (180), Expect = 2e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || || | || || ||| | |||||| | |||||||| || || Sbjct 5490 ATGCAGATATTCGTCAAGACATTAACTGGGAAGACGATTACTTTGGAAGTGGAGCCATCT 5431 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||||||| |||||||| || ||||| || ||| Sbjct 5430 GATACTATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAA 5371 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | || || |||||||||||||| | || |||| ||||| ||| Sbjct 5370 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAAC 5311 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| ||||||||| | |||||||| || || ||| | ||||| || Sbjct 5310 ATCCAAAAAGAGTCGACCCTCCATTTGGTATTACGATTGAGAGGTGGTAT 5261 Score = 154 bits (170), Expect = 1e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||||| || || ||| | ||||| | ||||||||||| || Sbjct 4806 ATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTCT 4747 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| | |||| || || |||||||||||||| ||||| || |||||| Sbjct 4746 GATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCAA 4687 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||||||||| | || || ||||| |||||||| || || | || ||||| ||| Sbjct 4686 CAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAAC 4627 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 ||||| || || || || |||||||||| ||| Sbjct 4626 ATTCAGAAAGAATCCACTCTACATTTGGTATTG 4594 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||||||||| |||| || || | ||||| | ||||| || || ||| Sbjct 5718 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5659 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||||||||||||| |||||||| ||||| || ||| Sbjct 5658 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5599 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||| | ||| ||||| ||||||||||| | || | || || ||||| Sbjct 5598 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGTACATTGTCTGACTACAAT 5539 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | |||||||| | ||||| | ||||| || Sbjct 5538 ATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGGTAT 5489 Score = 149 bits (164), Expect = 5e-31 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| |||| || || | ||||| | ||||| || || ||| Sbjct 5982 ATGCAAATTTTTGTGAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5923 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||||||||||||| |||||||| ||||| || ||| Sbjct 5922 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5863 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 || |||||||| | ||| ||||| ||||||||||| | ||| | || || || || || Sbjct 5862 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGA-TGGCCGAACATTGTCTGACTATAA 5804 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | |||||||| | ||||| | ||||| || Sbjct 5803 TATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGGTAT 5753 Score = 147 bits (162), Expect = 2e-30 Identities = 190/260 (73%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| || || || || || || |||| || | ||||| ||||| || Sbjct 4350 ATGCAAATATTTGTTAAGACCCTTACTGGGAAAACTATCACATTGGAAGTAGAACCTTCA 4291 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||| || |||||||| || || || ||||| Sbjct 4290 GATACAATTGAAAACGTTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCTCCAGATCAG 4231 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | || || |||||||||||||| | || |||| |||||||| Sbjct 4230 CAGCGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGGCGAACTCTTTCAGATTACAAT 4171 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACT 27227 ||||||||||| || ||| |||||||||| | || || || || ||| | || || Sbjct 4170 ATTCAAAAGGAATCTACCCTACATTTGGTACTTCGCTTACGTGGGGGC--CAGTAATGCT 4113 Query 27228 TTTGTAATA-TGCAATGCTT 27246 | | ||||| |||||| ||| Sbjct 4112 TATTTAATACTGCAATTCTT 4093 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || |||||||||||||| || || || | ||||| | ||||||||||| || Sbjct 4578 ATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAACCATCG 4519 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| |||||| |||||||||||||| ||||| || || || Sbjct 4518 GACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACCAG 4459 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | ||||| ||||||||||| || | || |||| ||||| || Sbjct 4458 CAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCAGATTATAAT 4399 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || || | || || || ||||| ||| | || || || Sbjct 4398 ATCCAAAAAGAATCTACACTGCACTTAGTCTTGCGATTGAGAGGAGGTAT 4349 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||| | || || || | ||||| | ||||||||||| || Sbjct 6210 ATGCAGATCTTTGTGAAGACTTTAACTGGTAAAACAATTACATTGGAAGTGGAACCTTCA 6151 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || ||| || || || ||||||||||| || || || |||||| Sbjct 6150 GACACCATCGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCAA 6091 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | |||||||| ||||||||||| || || | || |||||||| Sbjct 6090 CAGCGATTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACTCTATCTGATTACAAT 6031 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || | |||||||| || | ||| | || || || Sbjct 6030 ATTCAGAAAGAGTCCACACTTCATTTGGTGTTAAGATTGAGAGGAGGTAT 5981 >seq22504 Length=90246 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || || || || | || || || || || ||||| ||| Sbjct 25532 ATGCAAATTTTCGTGAAAACACTTACAGGGAAAACAATAACCCTCGAGGTTGAACCTTCC 25591 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || || |||||||||||||| ||||| || ||||||||||| Sbjct 25592 GATACGATCGAAAATGTAAAGGCTAAAATTCAAGACAAGGAAGGTATCCCACCCGATCAG 25651 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | |||| ||| || ||||| ||||||||| || || | || ||||| || Sbjct 25652 CAACGTCTTATATTCGCTGGTAAACAGTTGGAAGACGGTCGTACTCTATCGGATTATAAT 25711 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || || || ||||| ||||||||| ||||||| || Sbjct 25712 ATCCAGAAGGAATCCACTTTGCACTTGGTGTTGCGTTTGAGGGGTGGTAT 25761 Score = 134 bits (148), Expect = 1e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 || || || || || ||||| ||||| |||| || | || || |||||||||||| Sbjct 21023 ATAACCCTCGAGGTTGAACCTTCCGATACGATCGAAAATGTAAAGGCTAAAATTCAAGAC 21082 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 || ||||| || ||||||||||| || ||| | |||| ||| || ||||| ||||||||| Sbjct 21083 AAGGAAGGTATCCCACCCGATCAGCAACGTCTTATATTCGCTGGTAAACAGTTGGAAGAC 21142 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 || || | || ||||| || ||||| || || || |||||||| ||||| |||||| Sbjct 21143 GGTCGTACTCTATCGGATTATAATATTCAGAAAGAATCCACCTTACACTTGGTATTGCGT 21202 Query 27204 TTGCGGGGTGGCAT 27217 ||| | || || || Sbjct 21203 TTGAGAGGCGGTAT 21216 >seq2360 Length=4040 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 49824 ACCCGGTAAAAGACATTGGTTGAAAATTAAAAAAGACTACTTGTGCGATGGCGCCATGGC 49883 |||||||||| | |||||||||||| | || ||||| ||||| | | || || || || Sbjct 1042 ACCCGGTAAACGTCATTGGTTGAAAGTAAAGAAAGATTACTTATTTGGGGGTGCGATTGC 983 Query 49884 CGATAGCGTTGATTTGGTGGTTTTGGGTGCATGGTACGGTTCTGGAAAAAAGGGTGGCTT 49943 |||| | |||||| | ||| | || ||||||||||| | || | || |||||| || Sbjct 982 TGATACGGCTGATTTAATCGTTCTTGGCGCATGGTACGGGACAGGTAGAATGGGTGGGTT 923 Query 49944 CTTGTCTACATTTTTGATGGGATG-TCTCGACACAAACCGAAACGTTTGGACGACAGTAA 50002 |||| | || | ||||| || | | | ||| ||||| || || |||| Sbjct 922 GATGTCGATCTTCCTCATGGGCTGCTATGATGAGAAAACGAAAACATT-CCTTACCGTAA 864 Query 50003 CAAAGGTGCACACAGGCCAC 50022 | |||||||||| |||||| Sbjct 863 CTAAGGTGCACAATGGCCAC 844 >seq1409 Length=3155 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 49824 ACCCGGTAAAAGACATTGGTTGAAAATTAAAAAAGACTACTTGTGCGATGGCGCCATGGC 49883 |||||||||| | |||||||||||| | || ||||| ||||| | | || || || || Sbjct 1530 ACCCGGTAAACGTCATTGGTTGAAAGTAAAGAAAGATTACTTATTTGGGGGTGCGATTGC 1589 Query 49884 CGATAGCGTTGATTTGGTGGTTTTGGGTGCATGGTACGGTTCTGGAAAAAAGGGTGGCTT 49943 |||| | |||||| | ||| | || ||||||||||| | || | || |||||| || Sbjct 1590 TGATACGGCTGATTTAATCGTTCTTGGCGCATGGTACGGGACAGGTAGAATGGGTGGGTT 1649 Query 49944 CTTGTCTACATTTTTGATGGGATG-TCTCGACACAAACCGAAACGTTTGGACGACAGTAA 50002 |||| | || | ||||| || | | | ||| ||||| || || |||| Sbjct 1650 GATGTCGATCTTCCTCATGGGCTGCTATGATGAGAAAACGAAAACATT-CCTTACCGTAA 1708 Query 50003 CAAAGGTGCACACAGGCCAC 50022 | |||||||||| |||||| Sbjct 1709 CTAAGGTGCACAATGGCCAC 1728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434774849745600