Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 163 2e-35
seq22504 149 5e-31
seq2360 84.2 2e-11
seq1409 84.2 2e-11
>seq9911
Length=12084
Score = 163 bits (180), Expect = 2e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| |||||| | || || ||| ||||||| |||||||||||||| |
Sbjct 5034 ATGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAACCAGCT 4975
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || ||| ||| ||||||||||| ||||| || || |||||||||
Sbjct 4974 GATACCATAGAAAATGTGAAAGCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGATCAA 4915
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| |||| || ||||| ||||||||||| || || | || ||||||||
Sbjct 4914 CAACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAAT 4855
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||| || || | || |||| || || ||| | || || ||
Sbjct 4854 ATTCAAAAGGAATCAACTCTTCACCTGGTATTACGGTTGAGAGGAGGAAT 4805
Score = 163 bits (180), Expect = 2e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || || || | || || ||| | |||||| | |||||||| || ||
Sbjct 5490 ATGCAGATATTCGTCAAGACATTAACTGGGAAGACGATTACTTTGGAAGTGGAGCCATCT 5431
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| |||||||||||| |||||||| || ||||| || |||
Sbjct 5430 GATACTATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAA 5371
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | || || |||||||||||||| | || |||| ||||| |||
Sbjct 5370 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAAC 5311
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| ||||||||| | |||||||| || || ||| | ||||| ||
Sbjct 5310 ATCCAAAAAGAGTCGACCCTCCATTTGGTATTACGATTGAGAGGTGGTAT 5261
Score = 154 bits (170), Expect = 1e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| |||||||| || || ||| | ||||| | ||||||||||| ||
Sbjct 4806 ATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTCT 4747
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || |||| | |||| || || |||||||||||||| ||||| || ||||||
Sbjct 4746 GATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCAA 4687
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||||||||| | || || ||||| |||||||| || || | || ||||| |||
Sbjct 4686 CAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAAC 4627
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200
||||| || || || || |||||||||| |||
Sbjct 4626 ATTCAGAAAGAATCCACTCTACATTTGGTATTG 4594
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||||||||| |||| || || | ||||| | ||||| || || |||
Sbjct 5718 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5659
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| ||||||||||||||| |||||||| ||||| || |||
Sbjct 5658 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5599
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| |||||||| | ||| ||||| ||||||||||| | || | || || |||||
Sbjct 5598 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGTACATTGTCTGACTACAAT 5539
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || | |||||||| | ||||| | ||||| ||
Sbjct 5538 ATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGGTAT 5489
Score = 149 bits (164), Expect = 5e-31
Identities = 173/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| ||||| |||| || || | ||||| | ||||| || || |||
Sbjct 5982 ATGCAAATTTTTGTGAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5923
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| ||||||||||||||| |||||||| ||||| || |||
Sbjct 5922 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5863
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
|| |||||||| | ||| ||||| ||||||||||| | ||| | || || || || ||
Sbjct 5862 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGA-TGGCCGAACATTGTCTGACTATAA 5804
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || | |||||||| | ||||| | ||||| ||
Sbjct 5803 TATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGGTAT 5753
Score = 147 bits (162), Expect = 2e-30
Identities = 190/260 (73%), Gaps = 3/260 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| |||||||| || || || || || || |||| || | ||||| ||||| ||
Sbjct 4350 ATGCAAATATTTGTTAAGACCCTTACTGGGAAAACTATCACATTGGAAGTAGAACCTTCA 4291
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| |||||||| || |||||||| || || || |||||
Sbjct 4290 GATACAATTGAAAACGTTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCTCCAGATCAG 4231
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | || || |||||||||||||| | || |||| ||||||||
Sbjct 4230 CAGCGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGGCGAACTCTTTCAGATTACAAT 4171
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACT 27227
||||||||||| || ||| |||||||||| | || || || || ||| | || ||
Sbjct 4170 ATTCAAAAGGAATCTACCCTACATTTGGTACTTCGCTTACGTGGGGGC--CAGTAATGCT 4113
Query 27228 TTTGTAATA-TGCAATGCTT 27246
| | ||||| |||||| |||
Sbjct 4112 TATTTAATACTGCAATTCTT 4093
Score = 145 bits (160), Expect = 7e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || |||||||||||||| || || || | ||||| | ||||||||||| ||
Sbjct 4578 ATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAACCATCG 4519
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| |||||| |||||||||||||| ||||| || || ||
Sbjct 4518 GACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACCAG 4459
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | ||||| ||||||||||| || | || |||| ||||| ||
Sbjct 4458 CAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCAGATTATAAT 4399
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| || || || | || || || ||||| ||| | || || ||
Sbjct 4398 ATCCAAAAAGAATCTACACTGCACTTAGTCTTGCGATTGAGAGGAGGTAT 4349
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| | || || || | ||||| | ||||||||||| ||
Sbjct 6210 ATGCAGATCTTTGTGAAGACTTTAACTGGTAAAACAATTACATTGGAAGTGGAACCTTCA 6151
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || ||| || || || ||||||||||| || || || ||||||
Sbjct 6150 GACACCATCGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCAA 6091
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | |||||||| ||||||||||| || || | || ||||||||
Sbjct 6090 CAGCGATTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACTCTATCTGATTACAAT 6031
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||| || | |||||||| || | ||| | || || ||
Sbjct 6030 ATTCAGAAAGAGTCCACACTTCATTTGGTGTTAAGATTGAGAGGAGGTAT 5981
>seq22504
Length=90246
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| || || || || | || || || || || ||||| |||
Sbjct 25532 ATGCAAATTTTCGTGAAAACACTTACAGGGAAAACAATAACCCTCGAGGTTGAACCTTCC 25591
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | || || |||||||||||||| ||||| || |||||||||||
Sbjct 25592 GATACGATCGAAAATGTAAAGGCTAAAATTCAAGACAAGGAAGGTATCCCACCCGATCAG 25651
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | |||| ||| || ||||| ||||||||| || || | || ||||| ||
Sbjct 25652 CAACGTCTTATATTCGCTGGTAAACAGTTGGAAGACGGTCGTACTCTATCGGATTATAAT 25711
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || || || ||||| ||||||||| ||||||| ||
Sbjct 25712 ATCCAGAAGGAATCCACTTTGCACTTGGTGTTGCGTTTGAGGGGTGGTAT 25761
Score = 134 bits (148), Expect = 1e-26
Identities = 146/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083
|| || || || || ||||| ||||| |||| || | || || ||||||||||||
Sbjct 21023 ATAACCCTCGAGGTTGAACCTTCCGATACGATCGAAAATGTAAAGGCTAAAATTCAAGAC 21082
Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143
|| ||||| || ||||||||||| || ||| | |||| ||| || ||||| |||||||||
Sbjct 21083 AAGGAAGGTATCCCACCCGATCAGCAACGTCTTATATTCGCTGGTAAACAGTTGGAAGAC 21142
Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203
|| || | || ||||| || ||||| || || || |||||||| ||||| ||||||
Sbjct 21143 GGTCGTACTCTATCGGATTATAATATTCAGAAAGAATCCACCTTACACTTGGTATTGCGT 21202
Query 27204 TTGCGGGGTGGCAT 27217
||| | || || ||
Sbjct 21203 TTGAGAGGCGGTAT 21216
>seq2360
Length=4040
Score = 84.2 bits (92), Expect = 2e-11
Identities = 140/200 (70%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 49824 ACCCGGTAAAAGACATTGGTTGAAAATTAAAAAAGACTACTTGTGCGATGGCGCCATGGC 49883
|||||||||| | |||||||||||| | || ||||| ||||| | | || || || ||
Sbjct 1042 ACCCGGTAAACGTCATTGGTTGAAAGTAAAGAAAGATTACTTATTTGGGGGTGCGATTGC 983
Query 49884 CGATAGCGTTGATTTGGTGGTTTTGGGTGCATGGTACGGTTCTGGAAAAAAGGGTGGCTT 49943
|||| | |||||| | ||| | || ||||||||||| | || | || |||||| ||
Sbjct 982 TGATACGGCTGATTTAATCGTTCTTGGCGCATGGTACGGGACAGGTAGAATGGGTGGGTT 923
Query 49944 CTTGTCTACATTTTTGATGGGATG-TCTCGACACAAACCGAAACGTTTGGACGACAGTAA 50002
|||| | || | ||||| || | | | ||| ||||| || || ||||
Sbjct 922 GATGTCGATCTTCCTCATGGGCTGCTATGATGAGAAAACGAAAACATT-CCTTACCGTAA 864
Query 50003 CAAAGGTGCACACAGGCCAC 50022
| |||||||||| ||||||
Sbjct 863 CTAAGGTGCACAATGGCCAC 844
>seq1409
Length=3155
Score = 84.2 bits (92), Expect = 2e-11
Identities = 140/200 (70%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 49824 ACCCGGTAAAAGACATTGGTTGAAAATTAAAAAAGACTACTTGTGCGATGGCGCCATGGC 49883
|||||||||| | |||||||||||| | || ||||| ||||| | | || || || ||
Sbjct 1530 ACCCGGTAAACGTCATTGGTTGAAAGTAAAGAAAGATTACTTATTTGGGGGTGCGATTGC 1589
Query 49884 CGATAGCGTTGATTTGGTGGTTTTGGGTGCATGGTACGGTTCTGGAAAAAAGGGTGGCTT 49943
|||| | |||||| | ||| | || ||||||||||| | || | || |||||| ||
Sbjct 1590 TGATACGGCTGATTTAATCGTTCTTGGCGCATGGTACGGGACAGGTAGAATGGGTGGGTT 1649
Query 49944 CTTGTCTACATTTTTGATGGGATG-TCTCGACACAAACCGAAACGTTTGGACGACAGTAA 50002
|||| | || | ||||| || | | | ||| ||||| || || ||||
Sbjct 1650 GATGTCGATCTTCCTCATGGGCTGCTATGATGAGAAAACGAAAACATT-CCTTACCGTAA 1708
Query 50003 CAAAGGTGCACACAGGCCAC 50022
| |||||||||| ||||||
Sbjct 1709 CTAAGGTGCACAATGGCCAC 1728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434774849745600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |