Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq9911 159 8e-34 seq22504 123 6e-23 >seq9911 Length=12084 Score = 159 bits (176), Expect = 8e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| || || || ||||||||||||||||| | |||||| | |||||||| | || Sbjct 5060 TGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACGACCATCTTCTAATTGT 5119 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || ||||| || || |||||||| ||||| |||| ||||| || ||||||||||| Sbjct 5120 TTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTCTTTATCCTGGATCTTA 5179 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || ||||| ||||| ||||| |||||| || | |||||| |||||||| || Sbjct 5180 GCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGTGATGGTCTTTCCAGTT 5239 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | ||| || ||||| | ||||| Sbjct 5240 AAAGTTTTAACAAAAATTTGCAT 5262 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||||||||| || || ||||| || || ||||| | || || | ||||||||| Sbjct 4826 ACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCTTCC 4885 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 | |||||||| || || || | |||||||| || ||||| | |||||||||||| || Sbjct 4886 AATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGA 4945 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 |||||| |||||| ||||| ||||| |||| ||| || || || || || ||||| Sbjct 4946 ATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCCACTTCAAGTGTAATAGTCTTA 5005 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | ||| || ||||| | |||||| Sbjct 5006 CCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 140 bits (154), Expect = 8e-28 Identities = 163/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| || | ||||| ||||||||||| || || || ||||| | || || | || Sbjct 5995 TCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGATAGAGTGCGACC 6054 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| |||||||| || ||||| | || ||||| || || |||| ||||| || Sbjct 6055 ATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGGGAATACCTTCTTT 6114 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||||||||| ||| || || ||||||||||| || ||| || || | || || Sbjct 6115 GTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCCACTTCCAATGTAAT 6174 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118 || || || || | |||||| ||||| | ||||||| || Sbjct 6175 TGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATTCTA 6214 Score = 138 bits (152), Expect = 3e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| | ||| || || || ||||||||||| |||||||| | ||| || | ||||| || Sbjct 4369 GACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGAAAGCGTGCGGCCATCCTC 4428 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || || || || || || || | ||||| ||||| ||||| | ||||| ||||| || Sbjct 4429 CAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACCTTCTTTGTCTTG 4488 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 ||| ||| ||| |||||||| |||||||| || ||| || || | || || || || Sbjct 4489 GATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAATTGTTTT 4548 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||| || ||||| |||||||| | |||||| Sbjct 4549 TCCAGTAAGAGTTTTTACAAAGATTTGCATT 4579 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || || ||||||||||||||||||||||| | ||| || | ||||||||||| || Sbjct 5288 TGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCTTCCAATTGT 5347 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||| | ||||||||||| || || | ||||| || || || || ||| Sbjct 5348 TTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTTT 5407 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || ||||| || || ||||| || || || | ||| |||||||| || || Sbjct 5408 GCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTCTTCCCAGTT 5467 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | ||||| || || | |||||| Sbjct 5468 AATGTCTTGACGAATATCTGCAT 5490 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || |||||||| ||||| || ||||||||||| | | || | |||||||||| ||| Sbjct 4604 TGTAGAGTGGATTCTTTCTGAATGTTATAATCAGATAAAGTACGACCATCTTCCAACTGT 4663 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || || || | || ||||| || ||||| | |||||| ||||| |||||||| Sbjct 4664 TTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGTATTCCTTCTTTGTCTTGGATCTTA 4723 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| | || ||||| || ||||| ||| || || | || || ||||||||||| Sbjct 4724 GCTTTGGCATTCTCGATAGTATCAGAAGGTTCCACTTCCAATGTAATGGTCTTTCCCGTA 4783 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 ||||| || ||||| | |||||| Sbjct 4784 AGAGTTTTCACAAAAATTTGCATT 4807 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || ||||| || || |||||||| || || || | | || | |||||||||| ||| Sbjct 5516 TGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCTTCCAATTGC 5575 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| |||||||| | ||||||||||| || || | ||||||||||| || || ||| Sbjct 5576 TTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTT 5635 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| |||||||| || || || || ||||| || | || || || ||||| || Sbjct 5636 GCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGTC 5695 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | || |||||||| | ||||| Sbjct 5696 AAGGTTTTTACAAAAATTTGCAT 5718 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || ||||| || || |||||||| ||||| || | | || | |||||||||| ||| Sbjct 5780 TGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATCTTCCAATTGC 5839 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| |||||||| | ||||||||||| || || | ||||||||||| || || ||| Sbjct 5840 TTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTT 5899 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| |||||||| || || || || ||||| || | || || || ||||| || Sbjct 5900 GCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGTC 5959 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | || || ||||| | ||||| Sbjct 5960 AAGGTTTTCACAAAAATTTGCAT 5982 >seq22504 Length=90246 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | |||||| || || ||||| |||||||||| || || | || ||||||| ||| Sbjct 25735 GTGCAAAGTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTCTTCCAACTG 25676 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || ||||| ||||| ||||| || || || || | ||||||||||| || || || Sbjct 25675 TTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTT 25616 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || |||||||| || || || |||||||||||| || || || || || || Sbjct 25615 AGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGT 25556 Query 211091 GAGAGTCTTTACAAACACCTGCATTTTATGGTTACT 211126 || || || || || | |||||| || ||| || Sbjct 25555 AAGTGTTTTCACGAAAATTTGCATTGTAGCGTTTCT 25520 Score = 113 bits (124), Expect = 1e-19 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 ||||| ||||| || || |||||||||| || || | || ||||||| ||| || || Sbjct 21183 GTGGATTCTTTCTGAATATTATAATCCGATAGAGTACGACCGTCTTCCAACTGTTTACCA 21124 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| ||||| ||||| || || || || | ||||||||||| || || || || Sbjct 21123 GCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTT 21064 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG-AGAGT 211096 || |||||||| || || || |||||||||||| || || || || || ||| ||| Sbjct 21063 ACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGTGCAGAAA 21004 Query 211097 CTTTACAAAC-ACCTGCATTTTAT 211119 || | ||| |||| | |||||| Sbjct 21003 ATTAATGAACGACCTCCGTTTTAT 20980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158759842577825