Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq9911 140 8e-28 seq22504 129 1e-24 seq19654 84.2 5e-11 >seq9911 Length=12084 Score = 140 bits (154), Expect = 8e-28 Identities = 155/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 |||||||| ||||| ||||||| |||||| || | ||| || | |||||||| | ||| Sbjct 5516 TGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCTTCCAATTGC 5575 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||||||||| | ||||||||||| || || || |||||||||||||| || ||| Sbjct 5576 TTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAAT-TTT 5634 Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| || || ||| || || || || | || || || || || || || || || || Sbjct 5635 TGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGT 5694 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 ||| ||||||| || | |||||| Sbjct 5695 CAAGGTTTTTACAAAAATTTGCAT 5718 Score = 138 bits (152), Expect = 3e-27 Identities = 147/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564 || ||||| ||||| ||||| ||||| | ||||||||| | | ||| | |||||||| Sbjct 4826 ACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCTTCC 4885 Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624 | ||||| ||||| || || | |||||||| ||||| || || |||||||||||||| Sbjct 4886 AATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGA 4945 Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684 |||||| |||||| ||| ||||| || | | |||||| || | || || ||||| Sbjct 4946 ATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCCACTTCAAGTGTAATAGTCTTA 5005 Query 225685 CCCGTCAAAGTTTT 225698 || || |||||||| Sbjct 5006 CCAGTTAAAGTTTT 5019 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || ||||| ||||||| || ||||| | | || | |||||||||| || Sbjct 5060 TGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACGACCATCTTCTAATTGT 5119 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || |||||||| || ||||||||||| || || ||||||||||| || || |||||||| Sbjct 5120 TTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTCTTTATCCTGGATCTTA 5179 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 || ||| ||| ||||| || || | ||| || ||||| ||||| ||||| || || Sbjct 5180 GCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGTGATGGTCTTTCCAGTT 5239 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || | |||||| Sbjct 5240 AAAGTTTTAACAAAAATTTGCAT 5262 Score = 136 bits (150), Expect = 9e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 |||||||| ||||| ||||||| ||| || || | ||| |||| |||||||| | ||| Sbjct 5780 TGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATCTTCCAATTGC 5839 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||||||||| | ||||||||||| || || || |||||||||||||| || ||| Sbjct 5840 TTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAAT-TTT 5898 Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| || || ||| || || || || | || || || || || || || || || || Sbjct 5899 TGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGT 5958 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 ||| ||||| | || | |||||| Sbjct 5959 CAAGGTTTTCACAAAAATTTGCAT 5982 Score = 134 bits (148), Expect = 3e-26 Identities = 162/218 (74%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 || || ||| | ||| || || ||||||||||||| ||| ||||| | | || | || Sbjct 4363 TCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGAAAGCGTGCGGCC 4422 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | || ||||| || || || | ||||| ||||| || || |||||||| || Sbjct 4423 ATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACCTTCTTT 4482 Query 225618 GTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676 ||||||||| |||||| || || ||| |||||||| || | |||||| ||||| || | Sbjct 4483 GTCTTGGAT-TTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAA 4541 Query 225677 TCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 | || || || || | |||||||| || | ||||||| Sbjct 4542 TTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCATT 4579 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || ||||| ||||| || | ||||||||| | | ||| | |||||||| | ||| Sbjct 6008 TGAAGTGTGGACTCTTTCTGAATATTGTAATCAGATAGAGTGCGACCATCTTCCAATTGC 6067 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || ||||| | ||| ||||| || || ||||||||||| ||||| |||||||| Sbjct 6068 TTGCCGGCAAAGATCAATCGCTGTTGATCTGGGGGAATACCTTCTTTGTCCTGGATCTTA 6127 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 || ||| |||||||||||||| | |||||| || || || || || || || || Sbjct 6128 GCTTTTACATTCTCGATGGTGTCTGAAGGTTCCACTTCCAATGTAATTGTTTTACCAGTT 6187 Query 225691 AAAGTTTTTATGAACACTTGCATTTTA 225717 ||||| || | || | |||||| || Sbjct 6188 AAAGTCTTCACAAAGATCTGCATTCTA 6214 Score = 122 bits (134), Expect = 2e-22 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | || |||||||||||||| || | || ||||| | ||||| | || Sbjct 4591 TCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGATAAAGTACGACC 4650 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||| || ||||| || || | || ||||| || || || || ||||| || Sbjct 4651 ATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGTATTCCTTCTTT 4710 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| || || ||||| || || || | |||||| || || || || Sbjct 4711 GTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCACTTCCAATGTAAT 4770 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| ||||| | |||||| | || | ||||||| Sbjct 4771 GGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807 Score = 118 bits (130), Expect = 3e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 ||||| || || |||||||||| || ||||| | | ||| | |||||||| | || Sbjct 5288 TGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCTTCCAATTGT 5347 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| ||||| | ||||||||||| || || |||||||| || ||||| || ||| Sbjct 5348 TTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGAAT-TTT 5406 Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| || ||| ||| || || || || | ||||| || || || |||||||| || || Sbjct 5407 TGCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTCTTCCCAGT 5466 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| | ||||| Sbjct 5467 TAATGTCTTGACGAATATCTGCAT 5490 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || ||||| ||||| | ||||||||| | | ||||| ||||||||| | || Sbjct 4148 TGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGTTCGCCCATCTTCCAATTGT 4207 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || ||||| | || || || || || ||||||||||| || || || || ||| Sbjct 4208 TTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTATCCTGAAT-TTT 4266 Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || || || ||| || || ||||| | ||| || || || ||||| || || || || Sbjct 4267 AGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTGATAGTTTTCCCAGT 4326 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 | || || | || | |||||| Sbjct 4327 AAGGGTCTTAACAAATATTTGCAT 4350 >seq22504 Length=90246 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | ||||||||| || |||| ||| ||||| | | ||| | || ||||| | ||| Sbjct 25735 GTGCAAAGTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTCTTCCAACTG 25676 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 || |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || Sbjct 25675 TTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTT 25616 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| ||| |||||| || || || | ||| || || | || || || || || || Sbjct 25615 AGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGT 25556 Query 225690 CAAAGTTTTTATGAACACTTGCATTTTATGGTTACT 225725 | ||||| | ||| | ||||||| || ||| || Sbjct 25555 AAGTGTTTTCACGAAAATTTGCATTGTAGCGTTTCT 25520 Score = 113 bits (124), Expect = 1e-19 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 ||||||||||| || | ||| ||||| | | ||| | || ||||| | ||| || ||| Sbjct 21183 GTGGATTCTTTCTGAATATTATAATCCGATAGAGTACGACCGTCTTCCAACTGTTTACCA 21124 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 ||||| ||||| ||||| || ||||| || ||||||||||||||||| || || ||| Sbjct 21123 GCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTT 21064 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT-CAAAGT 225695 ||| |||||| || || || | ||| || || | || || || || || || || | Sbjct 21063 ACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGTGCAGAAA 21004 Query 225696 TTTTATGAAC-ACTTGCATTTTAT 225718 || |||||| || | | |||||| Sbjct 21003 ATTAATGAACGACCTCCGTTTTAT 20980 >seq19654 Length=72336 Score = 84.2 bits (92), Expect = 5e-11 Identities = 77/94 (82%), Gaps = 4/94 (4%) Strand=Plus/Minus Query 370676 GGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA--TG 370733 ||||||||||| |||||||||| || |||||||||||||| || ||||| || || || Sbjct 35555 GGATGACCAAAGAATCAGAATAGGTGCTGATAAAGGATAGGGTCTCCTCCTCC-GACCTG 35497 Query 370734 GATCAAAAAAGCTAGTATTAAAATTTCTATCAGT 370767 | ||||| ||| ||||||| | ||| | |||||| Sbjct 35496 G-TCAAAGAAGGTAGTATTGATATTACGATCAGT 35464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192127749925070