Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 140 8e-28
seq22504 129 1e-24
seq19654 84.2 5e-11
>seq9911
Length=12084
Score = 140 bits (154), Expect = 8e-28
Identities = 155/204 (76%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|||||||| ||||| ||||||| |||||| || | ||| || | |||||||| | |||
Sbjct 5516 TGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCTTCCAATTGC 5575
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| ||||||||||| | ||||||||||| || || || |||||||||||||| || |||
Sbjct 5576 TTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAAT-TTT 5634
Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||| || || ||| || || || || | || || || || || || || || || ||
Sbjct 5635 TGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGT 5694
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
||| ||||||| || | ||||||
Sbjct 5695 CAAGGTTTTTACAAAAATTTGCAT 5718
Score = 138 bits (152), Expect = 3e-27
Identities = 147/194 (76%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564
|| ||||| ||||| ||||| ||||| | ||||||||| | | ||| | ||||||||
Sbjct 4826 ACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCTTCC 4885
Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624
| ||||| ||||| || || | |||||||| ||||| || || ||||||||||||||
Sbjct 4886 AATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGA 4945
Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684
|||||| |||||| ||| ||||| || | | |||||| || | || || |||||
Sbjct 4946 ATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCCACTTCAAGTGTAATAGTCTTA 5005
Query 225685 CCCGTCAAAGTTTT 225698
|| || ||||||||
Sbjct 5006 CCAGTTAAAGTTTT 5019
Score = 136 bits (150), Expect = 9e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| || || ||||| ||||||| || ||||| | | || | |||||||||| ||
Sbjct 5060 TGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACGACCATCTTCTAATTGT 5119
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| |||||||| || ||||||||||| || || ||||||||||| || || ||||||||
Sbjct 5120 TTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTCTTTATCCTGGATCTTA 5179
Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690
|| ||| ||| ||||| || || | ||| || ||||| ||||| ||||| || ||
Sbjct 5180 GCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGTGATGGTCTTTCCAGTT 5239
Query 225691 AAAGTTTTTATGAACACTTGCAT 225713
|||||||| | || | ||||||
Sbjct 5240 AAAGTTTTAACAAAAATTTGCAT 5262
Score = 136 bits (150), Expect = 9e-27
Identities = 154/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|||||||| ||||| ||||||| ||| || || | ||| |||| |||||||| | |||
Sbjct 5780 TGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATCTTCCAATTGC 5839
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| ||||||||||| | ||||||||||| || || || |||||||||||||| || |||
Sbjct 5840 TTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAAT-TTT 5898
Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||| || || ||| || || || || | || || || || || || || || || ||
Sbjct 5899 TGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGT 5958
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
||| ||||| | || | ||||||
Sbjct 5959 CAAGGTTTTCACAAAAATTTGCAT 5982
Score = 134 bits (148), Expect = 3e-26
Identities = 162/218 (74%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
|| || ||| | ||| || || ||||||||||||| ||| ||||| | | || | ||
Sbjct 4363 TCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGAAAGCGTGCGGCC 4422
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||| || | || ||||| || || || | ||||| ||||| || || |||||||| ||
Sbjct 4423 ATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACCTTCTTT 4482
Query 225618 GTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676
||||||||| |||||| || || ||| |||||||| || | |||||| ||||| || |
Sbjct 4483 GTCTTGGAT-TTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAA 4541
Query 225677 TCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
| || || || || | |||||||| || | |||||||
Sbjct 4542 TTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCATT 4579
Score = 131 bits (144), Expect = 4e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| || ||||| ||||| || | ||||||||| | | ||| | |||||||| | |||
Sbjct 6008 TGAAGTGTGGACTCTTTCTGAATATTGTAATCAGATAGAGTGCGACCATCTTCCAATTGC 6067
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| || || ||||| | ||| ||||| || || ||||||||||| ||||| ||||||||
Sbjct 6068 TTGCCGGCAAAGATCAATCGCTGTTGATCTGGGGGAATACCTTCTTTGTCCTGGATCTTA 6127
Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690
|| ||| |||||||||||||| | |||||| || || || || || || || ||
Sbjct 6128 GCTTTTACATTCTCGATGGTGTCTGAAGGTTCCACTTCCAATGTAATTGTTTTACCAGTT 6187
Query 225691 AAAGTTTTTATGAACACTTGCATTTTA 225717
||||| || | || | |||||| ||
Sbjct 6188 AAAGTCTTCACAAAGATCTGCATTCTA 6214
Score = 122 bits (134), Expect = 2e-22
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | || |||||||||||||| || | || ||||| | ||||| | ||
Sbjct 4591 TCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGATAAAGTACGACC 4650
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||| || ||||| || || | || ||||| || || || || ||||| ||
Sbjct 4651 ATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGTATTCCTTCTTT 4710
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| || || ||||| || || || | |||||| || || || ||
Sbjct 4711 GTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCACTTCCAATGTAAT 4770
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| ||||| | |||||| | || | |||||||
Sbjct 4771 GGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807
Score = 118 bits (130), Expect = 3e-21
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
||||| || || |||||||||| || ||||| | | ||| | |||||||| | ||
Sbjct 5288 TGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCTTCCAATTGT 5347
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| ||||| ||||| | ||||||||||| || || |||||||| || ||||| || |||
Sbjct 5348 TTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGAAT-TTT 5406
Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||| || ||| ||| || || || || | ||||| || || || |||||||| || ||
Sbjct 5407 TGCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTCTTCCCAGT 5466
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||| | |||||
Sbjct 5467 TAATGTCTTGACGAATATCTGCAT 5490
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| || || ||||| ||||| | ||||||||| | | ||||| ||||||||| | ||
Sbjct 4148 TGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGTTCGCCCATCTTCCAATTGT 4207
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| || || ||||| | || || || || || ||||||||||| || || || || |||
Sbjct 4208 TTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTATCCTGAAT-TTT 4266
Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| || || ||| || || ||||| | ||| || || || ||||| || || || ||
Sbjct 4267 AGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTGATAGTTTTCCCAGT 4326
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
| || || | || | ||||||
Sbjct 4327 AAGGGTCTTAACAAATATTTGCAT 4350
>seq22504
Length=90246
Score = 129 bits (142), Expect = 1e-24
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| | ||||||||| || |||| ||| ||||| | | ||| | || ||||| | |||
Sbjct 25735 GTGCAAAGTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTCTTCCAACTG 25676
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
|| |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || ||
Sbjct 25675 TTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTT 25616
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||| ||| |||||| || || || | ||| || || | || || || || || ||
Sbjct 25615 AGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGT 25556
Query 225690 CAAAGTTTTTATGAACACTTGCATTTTATGGTTACT 225725
| ||||| | ||| | ||||||| || ||| ||
Sbjct 25555 AAGTGTTTTCACGAAAATTTGCATTGTAGCGTTTCT 25520
Score = 113 bits (124), Expect = 1e-19
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
||||||||||| || | ||| ||||| | | ||| | || ||||| | ||| || |||
Sbjct 21183 GTGGATTCTTTCTGAATATTATAATCCGATAGAGTACGACCGTCTTCCAACTGTTTACCA 21124
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
||||| ||||| ||||| || ||||| || ||||||||||||||||| || || |||
Sbjct 21123 GCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTT 21064
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT-CAAAGT 225695
||| |||||| || || || | ||| || || | || || || || || || || |
Sbjct 21063 ACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGTGCAGAAA 21004
Query 225696 TTTTATGAAC-ACTTGCATTTTAT 225718
|| |||||| || | | ||||||
Sbjct 21003 ATTAATGAACGACCTCCGTTTTAT 20980
>seq19654
Length=72336
Score = 84.2 bits (92), Expect = 5e-11
Identities = 77/94 (82%), Gaps = 4/94 (4%)
Strand=Plus/Minus
Query 370676 GGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA--TG 370733
||||||||||| |||||||||| || |||||||||||||| || ||||| || || ||
Sbjct 35555 GGATGACCAAAGAATCAGAATAGGTGCTGATAAAGGATAGGGTCTCCTCCTCC-GACCTG 35497
Query 370734 GATCAAAAAAGCTAGTATTAAAATTTCTATCAGT 370767
| ||||| ||| ||||||| | ||| | ||||||
Sbjct 35496 G-TCAAAGAAGGTAGTATTGATATTACGATCAGT 35464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192127749925070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |