Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 109 4e-19
>seq9911
Length=12084
Score = 109 bits (120), Expect = 4e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| |||| ||| | ||| |||| ||| | ||||||||| ||||||||||||||||| |
Sbjct 4808 CCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTG-- 4865
Query 101072 ATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129
|||| | || |||||||||||| ||||| ||| |||| | | |||||| || |
Sbjct 4866 ATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAG 4925
Query 101130 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT- 101188
| | ||||| ||||| ||| ||| |||||||| | | || || | | |||
Sbjct 4926 GGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTG--GTTC 4983
Query 101189 -GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
||| | |||||||| || || || || ||||||| |||||| |||||
Sbjct 4984 CACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088
||||| || | ||| ||||| ||||| |||||||| || | || || | ||||||
Sbjct 5509 CACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCTTC 5568
Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148
|||||| ||||| || | || | | |||||||||| || | |||||| |||||
Sbjct 5569 CAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTG 5628
Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTT 101208
||||||| ||| || | | | || || | | | ||| | ||||| |||||
Sbjct 5629 AATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTT 5688
Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|| ||||| ||||| | ||||||||||||
Sbjct 5689 TCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088
||||| || | ||| ||||| ||||| ||||| || || | || ||| | ||||||
Sbjct 5773 CACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATCTTC 5832
Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148
|||||| ||||| || | || | | |||||||||| || | |||||| |||||
Sbjct 5833 CAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTG 5892
Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTT 101208
||||||| ||| || | | | || || | | | ||| | ||||| |||||
Sbjct 5893 AATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTT 5952
Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|| ||||| ||||| | ||||||||||||
Sbjct 5953 TCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982
Score = 87.8 bits (96), Expect = 1e-12
Identities = 161/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| |||| |||||||||||||| || | || || ||||| |||||||||||||| |
Sbjct 5984 CCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAG-- 6041
Query 101072 ATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129
|||| | || |||||||||||| ||||| ||| | || | | ||||| ||| ||
Sbjct 6042 ATAGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGG 6101
Query 101130 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT- 101188
| | ||||||||||| || || ||| |||| | | || || || | |||
Sbjct 6102 GAATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTC--TGAAGGTTC 6159
Query 101189 -GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239
||| | ||||| ||||| || || || || || | ||| || ||||||
Sbjct 6160 CACTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATT 6211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409528966673895
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |