Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1220 370 9e-98 >seq1220 Length=9943 Score = 370 bits (410), Expect = 9e-98 Identities = 642/922 (70%), Gaps = 12/922 (1%) Strand=Plus/Plus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||| || | |||||||||||| ||| ||||| || || |||||||| || || Sbjct 7158 AACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCGT 7217 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366 || || | | |||||||||||| ||||| ||| || ||| ||||||||| ||| Sbjct 7218 GGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTAG 7277 Query 4367 AGC-TACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAA 4425 | | ||| |||| |||||| |||||||| |||||||| ||||| || |||||| | Sbjct 7278 TTCGTTCAAT-AATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336 Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485 |||| ||||| || ||||| | || | || | ||||||||| || || || || | Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATA 4545 | || ||||| ||| | ||| || ||||| | ||| | || ||| |||| Sbjct 7397 CGCAAATAATATCGACGATTCGAGATTTCGACGGTTTTTGTACAATATAAGAAAATAATA 7456 Query 4546 AACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTA 4605 | || ||||| ||| ||||||| ||||| || | | || | ||| || || || |||| Sbjct 7457 AGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTTA 7516 Query 4606 ATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGA 4665 || ||||| | ||||||||||| | |||||| || | ||||| || || |||| Sbjct 7517 GACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAGA 7576 Query 4666 ATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTT 4725 | || ||||| || || || || |||||||| || ||||| | |||| Sbjct 7577 AAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTACTGC 7636 Query 4726 TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGT 4785 | ||||||| | ||||||||||||||||| ||||| || | ||| | ||| || | Sbjct 7637 TGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCGCAT 7696 Query 4786 TAAATAATTTACTTTTTTCAAAT--GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 | ||||| | || |||| | ||||| ||||| || || || || | ||| || Sbjct 7697 TGAATAA--AAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGTA 7754 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 |||||| ||| ||||| || || ||||| ||||| |||||||| || | ||||| || Sbjct 7755 CATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGT 7814 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 ||||||||| || | || ||| | ||| || | ||||| || || || || || || Sbjct 7815 TACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGATGC 7874 Query 4964 TGCAAAAAACGCCAAAAC--ATGAGATATAAAGTACTGTTCGTCA-GGCTTAAGTTTTTT 5020 || ||||| ||||| || || |||| || || || |||||| | |||| ||| || Sbjct 7875 AGCGAAAAATGCCAAGACGTATTTGATAAAATGT-CT-CTCGTCATCGGTTAA-TTTATT 7931 Query 5021 CCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 ||| || | |||| ||| |||||| |||||||| ||||||||||| ||||| || Sbjct 7932 CCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGC 7991 Query 5081 TTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTGTTGTC 5140 || |||||| ||| ||||||||| ||||| | || || | | ||||||| ||| Sbjct 7992 TTGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGG 8051 Query 5141 GTTAGGTGTAAGAAGCGGTTCT 5162 || | ||||||| |||||| Sbjct 8052 ATTTTCTTTAAGAAGTGGTTCT 8073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426912170767865