Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 370 9e-98
>seq1220
Length=9943
Score = 370 bits (410), Expect = 9e-98
Identities = 642/922 (70%), Gaps = 12/922 (1%)
Strand=Plus/Plus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
||| || | |||||||||||| ||| ||||| || || |||||||| || ||
Sbjct 7158 AACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCGT 7217
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366
|| || | | |||||||||||| ||||| ||| || ||| ||||||||| |||
Sbjct 7218 GGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTAG 7277
Query 4367 AGC-TACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAA 4425
| | ||| |||| |||||| |||||||| |||||||| ||||| || |||||| |
Sbjct 7278 TTCGTTCAAT-AATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336
Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485
|||| ||||| || ||||| | || | || | ||||||||| || || || || |
Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396
Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATA 4545
| || ||||| ||| | ||| || ||||| | ||| | || ||| ||||
Sbjct 7397 CGCAAATAATATCGACGATTCGAGATTTCGACGGTTTTTGTACAATATAAGAAAATAATA 7456
Query 4546 AACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTA 4605
| || ||||| ||| ||||||| ||||| || | | || | ||| || || || ||||
Sbjct 7457 AGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTTA 7516
Query 4606 ATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGA 4665
|| ||||| | ||||||||||| | |||||| || | ||||| || || ||||
Sbjct 7517 GACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAGA 7576
Query 4666 ATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTT 4725
| || ||||| || || || || |||||||| || ||||| | ||||
Sbjct 7577 AAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTACTGC 7636
Query 4726 TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGT 4785
| ||||||| | ||||||||||||||||| ||||| || | ||| | ||| || |
Sbjct 7637 TGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCGCAT 7696
Query 4786 TAAATAATTTACTTTTTTCAAAT--GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843
| ||||| | || |||| | ||||| ||||| || || || || | ||| ||
Sbjct 7697 TGAATAA--AAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGTA 7754
Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903
|||||| ||| ||||| || || ||||| ||||| |||||||| || | ||||| ||
Sbjct 7755 CATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGT 7814
Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963
||||||||| || | || ||| | ||| || | ||||| || || || || || ||
Sbjct 7815 TACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGATGC 7874
Query 4964 TGCAAAAAACGCCAAAAC--ATGAGATATAAAGTACTGTTCGTCA-GGCTTAAGTTTTTT 5020
|| ||||| ||||| || || |||| || || || |||||| | |||| ||| ||
Sbjct 7875 AGCGAAAAATGCCAAGACGTATTTGATAAAATGT-CT-CTCGTCATCGGTTAA-TTTATT 7931
Query 5021 CCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080
||| || | |||| ||| |||||| |||||||| ||||||||||| ||||| ||
Sbjct 7932 CCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGC 7991
Query 5081 TTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTGTTGTC 5140
|| |||||| ||| ||||||||| ||||| | || || | | ||||||| |||
Sbjct 7992 TTGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGG 8051
Query 5141 GTTAGGTGTAAGAAGCGGTTCT 5162
|| | ||||||| ||||||
Sbjct 8052 ATTTTCTTTAAGAAGTGGTTCT 8073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426912170767865
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |