Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1220 370 2e-97 seq9764 223 5e-53 >seq1220 Length=9943 Score = 370 bits (410), Expect = 2e-97 Identities = 640/920 (70%), Gaps = 11/920 (1%) Strand=Plus/Plus Query 46328 TAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCA 46387 |||| || | |||||||||||| || || ||| || ||||| |||||||| || ||| Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216 Query 46388 ATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTA 46447 ||||| | | |||||||||||| ||||| | |||||||| ||||| | | |||| Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276 Query 46448 ATTC-TGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTC 46506 ||| | ||| | ||| || || || ||||| |||||| |||| || || ||| Sbjct 7277 GTTCGTTCAATAA-TCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTC 7335 Query 46507 ATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCA 46566 |||||||| | | || || | || || |||||||||||||| || || || || Sbjct 7336 ATTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCG 7395 Query 46567 TCCGATAT--TATCGATGTTACT-GTTTCCTCACTTGGTGGATGCATCAAATGTTTAAAC 46623 || | || |||||| | | | | || | || ||| || | | || ||| Sbjct 7396 TCGCAAATAATATCGACGATTCGAGATTTCG-AC--GGTTTTTGTACAATATAAGAAAAT 7452 Query 46624 ATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAAT 46683 | ||| || ||||| ||| |||| | |||||||| | |||||||| || || || Sbjct 7453 AATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAA 7512 Query 46684 GTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAA 46743 || || || ||||| ||||| | |||||| | |||||| || | || || ||| || Sbjct 7513 GTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAG 7572 Query 46744 AAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTA 46803 ||||| || ||||| || || ||||| || || | | ||| ||| | | || || ||| Sbjct 7573 AAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTA 7632 Query 46804 -TGA--ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATA 46860 || ||||| | ||||| | ||| ||||| ||| ||||| | ||||||||| Sbjct 7633 CTGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATC 7692 Query 46861 GCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTA 46920 ||||| || | ||| | ||| || | || | | ||| || || || | | || Sbjct 7693 GCATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTG 7752 Query 46921 TACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 46980 |||||||| |||||| || ||||| || || ||||| ||||||||||| | |||||| Sbjct 7753 TACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCA 7812 Query 46981 GTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTA 47040 || | || |||||| || ||| ||||| || ||| ||||| || |||||||| Sbjct 7813 GTTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGAT 7872 Query 47041 GCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTC 47100 ||||| ||||||||||| || | ||| ||||||| | | || || || | ||||||| Sbjct 7873 GCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTC 7932 Query 47101 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCT 47160 || | || |||||| | |||| |||||||||||| | |||||| || || || || ||| Sbjct 7933 CAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCT 7992 Query 47161 TTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGA 47220 | ||| || || ||| ||||| |||||| || || |||| |||||||| || ||| Sbjct 7993 TGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGGA 8052 Query 47221 TTTTTTGCAAGTATAGGTTC 47240 |||| | ||| | ||||| Sbjct 8053 TTTTCTTTAAGAAGTGGTTC 8072 >seq9764 Length=88291 Score = 223 bits (246), Expect = 5e-53 Identities = 394/574 (69%), Gaps = 3/574 (1%) Strand=Plus/Plus Query 75366 TCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATAC 75425 ||||||| | ||||| || || || | |||||||| || | |||||| ||||| | Sbjct 27298 TCTTATCGACAGTGAATTGTATAGGCTTTGCGGCTGGTTTCGTTCTTAGATAATACATTC 27357 Query 75426 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCG 75485 | || || | ||| |||| ||||||||||| || ||| || | ||||| | Sbjct 27358 CCGTCTTCAAACCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAG 27417 Query 75486 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 75545 | | | | || | ||||| ||||||||| |||||||||||||| || | ||| |||| Sbjct 27418 GCTTCTCGACGTGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCG 27477 Query 75546 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 75605 | || ||||| ||| | || |||||||| | |||||| | | | ||||||| Sbjct 27478 CTTGGTTAATAATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATAT 27537 Query 75606 CATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGA 75662 |||| || | | |||| || || || || | || | | || |||||| | Sbjct 27538 CATCCGGTATTCCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCA 27597 Query 75663 TCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTT 75722 | || || | ||| | | ||| ||||| | | | | | ||||| ||||||| | | Sbjct 27598 TGTCGTCGTCCCAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGATTAACGACCT 27657 Query 75723 GAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 75782 | |||||||||||||| || | || ||||| || || || || ||||| | |||| Sbjct 27658 GGAATTCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATT 27717 Query 75783 CATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTAT 75842 | || ||||| || |||||||| || ||||| |||||||||||||| | | |||| || Sbjct 27718 CGTTATTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAAT 27777 Query 75843 TTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATG 75902 |||| | ||||||| | ||| || |||||| |||||||||| ||||||| || Sbjct 27778 TTCTTACACCATGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGATCTGTTG 27837 Query 75903 GTACAACATCCCAGAGATCGTATTGTAGAATTCC 75936 | || | ||| | ||||||||||| ||| || Sbjct 27838 GCGTTACGTTCCACATATCGTATTGTAAAATACC 27871 Score = 208 bits (230), Expect = 1e-48 Identities = 391/574 (68%), Gaps = 3/574 (1%) Strand=Plus/Plus Query 75366 TCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATAC 75425 ||||||| | ||||| || || || | |||||||| || | ||| || ||||| | Sbjct 24162 TCTTATCGACAGTGAATTGTATAGGTTTTGCGGCTGGTTTCGTCCTTAGGTAATACATTC 24221 Query 75426 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCG 75485 | || || | ||| |||| ||||||||||| || ||| || | ||||| | Sbjct 24222 CCGTCTTCAAACCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAG 24281 Query 75486 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 75545 | | | | || | ||||| ||||||||| |||||||||||||| || | ||| |||| Sbjct 24282 GCTTCTCGACGTGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCG 24341 Query 75546 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 75605 | || ||||| ||| | || |||||||| | |||||| | | | ||||||| Sbjct 24342 CTTGGTTAATAATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATAT 24401 Query 75606 CATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGA 75662 |||| || | | |||| || || || || | || | | || |||||| | Sbjct 24402 CATCCGGTATTCCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCA 24461 Query 75663 TCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTT 75722 | || || | ||| | | ||| ||||| | | | | | ||||| | ||||| | | Sbjct 24462 TGTCGTCGTCCCAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGGTTAACGACCT 24521 Query 75723 GAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 75782 | |||||||||||||| || | || ||||| || || || || ||||| | |||| Sbjct 24522 GGAATTCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATT 24581 Query 75783 CATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTAT 75842 | || ||||| || |||||||| || ||||| |||||||||||||| | | |||| || Sbjct 24582 CGTTATTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAAT 24641 Query 75843 TTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATG 75902 |||| | ||||||| | ||| || |||||| |||||||||| |||| || || Sbjct 24642 TTCTTACACCATGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGATTTGTTG 24701 Query 75903 GTACAACATCCCAGAGATCGTATTGTAGAATTCC 75936 | || | ||| | ||||||||||| ||| || Sbjct 24702 GCGTTACGTTCCACATATCGTATTGTAAAATACC 24735 Score = 131 bits (144), Expect = 2e-25 Identities = 311/458 (68%), Gaps = 18/458 (4%) Strand=Plus/Plus Query 75983 TCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTA 76042 || || | ||| ||||| ||||| || || | ||||| | || |||||||||| | Sbjct 25037 TCGGCCAATTCACAACTAGCCTCCAAAGCGGCATAATACAACGTCTCGAAAATCTGCAAG 25096 Query 76043 TT-AAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAA-AGAATAAATGCATCTG 76100 || || || | ||||| |||||| | || | | | || | |||||| ||||| | Sbjct 25097 TTTAACATGC-GAGCTTCCTCGCTATCATACGGC-ATTCTCAACAAAATAAAAGCATCGG 25154 Query 76101 CTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTG 76160 | || ||||| | ||| ||||| || |||||||||||| |||| || ||| ||| | Sbjct 25155 CAAGGCCCTGTATTCCGATACCGATCGGTCTATGTCTCATATTCGACGTTTTGCTTTCGG 25214 Query 76161 GAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCA 76220 | || || ||||| ||||| ||||| || || || | || | || | ||| | Sbjct 25215 GTATCGGATAATAGTTAATGTCTATGATCTTGTTCAAGTTGCGCGTGACGATTTTCGTGA 25274 Query 76221 CGTCCTT-TAGTTTGAGAAAATC--AAATTTTCC-ATC---TATCACAAACATATTAAGA 76273 ||| ||| ||||| | ||||| | | |||| ||| | | || |||||||| | Sbjct 25275 CGTTCTTCAAGTTTTCG-AAATCGTACGTCTTCCTATCCGGTTTTACGAACATATTCACG 25333 Query 76274 GCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTG---GCATATTGTATTATC 76330 || || || |||||||||||||| || | || | | ||| | ||| | || ||| Sbjct 25334 GCAATCGACGCTAGATTACAAACTGCAATTTCGT---CTTTGGACGTATACTCTACGATC 25390 Query 76331 TCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTA 76390 || ||||||| || |||| ||||| ||||| || || ||||||||||| || || Sbjct 25391 TCGGTGCATAAGTTGCTACTTTTGATCGTTCCCAGGTTCTGTTGGTTGCTTTTACGATTG 25450 Query 76391 CATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428 || | |||||| || || | | || || || ||||| Sbjct 25451 CAAGCGTCCTTGTAGAGCATGTAAGGGGTACCGGTTTC 25488 Score = 109 bits (120), Expect = 8e-19 Identities = 414/644 (64%), Gaps = 8/644 (1%) Strand=Plus/Plus Query 76581 ACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATA 76640 ||| ||| | | ||| || ||||||||||| | || |||||||| || ||| ||| | Sbjct 25802 ACTTACCGTTTGCCTCGACGCGTTTCATAAACAAGTCGGGTATCCAAAGGGCATAAAACA 25861 Query 76641 GATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAA 76700 ||| | | | |||||| | || |||||||| || | || | ||| |||| | Sbjct 25862 AATCCCTAGCACGCGCTTCTTCGATGCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGA 25921 Query 76701 TATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCT 76760 |||| | ||||| || || | || || || | | | ||||| | || || || || | Sbjct 25922 TATCGGCGTGCCAGGGCTCCAAGTAAATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTT 25981 Query 76761 GATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATG 76820 |||| | || | || || ||||| |||| || | ||| || | | ||||| ||| Sbjct 25982 GATCAACGTAACGCGCCGTATTATTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATA 26041 Query 76821 TACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTA 76880 || || || || | ||||||| |||| || | ||||| | || ||| | Sbjct 26042 CGCCGTTCGTGCCGGCAATATAAGTTCCTTTCGCTCTTATATTGTGCACGTTTACGCCGA 26101 Query 76881 TTCCTCCTGCCATTTTAGAGAT-TAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 | || || || || || || ||| || || | ||| | | || ||||| Sbjct 26102 TACCGCCGGCTGACTTCGAAATGTAG-GCGCATTGCGCCAAGCAGGTGAAAATCCCCTCG 26160 Query 76940 ATACTATCATC---CATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996 || || || |||||| |||| ||| || ||| | ||| | | || Sbjct 26161 ATCGAGTCTTCGGGCATCATC--AAGAGGAAG-CATGAAGAAAGCTGAGGTTTTGGTGTA 26217 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056 | || |||| || ||| || || || || || | || || || |||||| Sbjct 26218 GCCGCCGAGAACAGAGTCGGACTAGCGTGCGTAAAATATCTCTCCGATAGGTAATTGTAG 26277 Query 77057 GTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATA 77116 ||||| ||||| || || ||||| || ||||| ||||| || ||||||| |||| Sbjct 26278 GTTTCGATAACGGCATCGATATCTTCGCCGTGGATTCCAACAGCTACCCGCATCAGCATA 26337 Query 77117 TGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTT 77176 || ||||| | ||| || ||||| ||| || || | || ||| | || || ||| Sbjct 26338 TGTTGAGGCCTTTCGACGATCTTACCATTAATGCGTAAGAGATACGATCTCTCTAAGGTT 26397 Query 77177 TTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||| || || || ||||| |||||||| || ||||||||||| Sbjct 26398 TTAAAGCCGAAGTAATTGTAGGAAAAGTCCCTGTCGTAAATAAT 26441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712699087089600