Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 102 2e-16
seq22504 87.8 4e-12
>seq9911
Length=12084
Score = 102 bits (112), Expect = 2e-16
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| || || ||||||||||||||||| ||||| | | ||| | |||||||| |
Sbjct 5287 ATGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCTTCCAATTG 5346
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| || || ||||| | | || ||||| | | ||| ||||| || |||||||||||
Sbjct 5347 TTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTT 5406
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
| ||| ||| | || | | || || ||| ||||| | |||||| || || || ||
Sbjct 5407 TGCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTCTTCCCAGT 5466
Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| ||||| | ||||||
Sbjct 5467 TAATGTCTTGACGAATATCTGCAT 5490
Score = 98.7 bits (108), Expect = 2e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| || |||||||| || || ||||| || |||||||| | || ||| | ||||||||
Sbjct 4826 ACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCTTCC 4885
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
| || || || || || | | || || || | | |||||||||||| ||||||
Sbjct 4886 AATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGA 4945
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| ||| ||| ||| | |||| | | || | || |||||||| |||||||| ||
Sbjct 4946 ATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCCACTTCAAGTGTAATAGTCTTA 5005
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || | ||| || || || | ||||||
Sbjct 5006 CCAGTTAAAGTTTTAACAAAAATCTGCAT 5034
Score = 89.7 bits (98), Expect = 1e-12
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961
|| || ||||| ||||||||||| || ||||| | | || | ||||| || | |
Sbjct 4376 TGCAGTGTAGATTCTTTTTGGATATTATAATCTGAAAGCGTGCGGCCATCCTCCAATTGT 4435
Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021
|||||||| || || | | |||||||| | | || ||||| || ||||| ||||||
Sbjct 4436 TTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACCTTCTTTGTCTTGGATTTTT 4495
Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081
||| || | || | | |||| || || ||||| | ||||| ||||| || ||
Sbjct 4496 GCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAATTGTTTTTCCAGTA 4555
Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105
||||| || || |||| ||||||
Sbjct 4556 AGAGTTTTTACAAAGATTTGCATT 4579
Score = 89.7 bits (98), Expect = 1e-12
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| |||||||| || |||||||| || || || | || |||| ||||||
Sbjct 5771 AGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATCT 5830
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| | || || |||||||| | | || ||||| | | ||| |||||||| |||
Sbjct 5831 TCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCT 5890
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||||||| ||| || | || | | || || ||| ||||| | ||||| |||
Sbjct 5891 TGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTT 5950
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | || ||||| || | |||||
Sbjct 5951 TTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982
Score = 86.0 bits (94), Expect = 1e-11
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| |||||||| || |||||||| ||||| || | || || | ||||||
Sbjct 5507 AGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCT 5566
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| | || || |||||||| | | || ||||| | | ||| |||||||| |||
Sbjct 5567 TCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCT 5626
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||||||| ||| || | || | | || || ||| ||||| | ||||| |||
Sbjct 5627 TGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTT 5686
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | || || || || | |||||
Sbjct 5687 TTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718
>seq22504
Length=90246
Score = 87.8 bits (96), Expect = 4e-12
Identities = 154/223 (69%), Gaps = 1/223 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | ||| || || || ||||| || ||||| | || ||| | || ||||| |
Sbjct 25738 CAAG-TGCAAAGTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTCTTCCA 25680
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
||| || ||||| ||||| | ||||| || | | ||| |||||||| |||||||
Sbjct 25679 ACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAA 25620
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| || ||| | || | | || ||| || || || || || || ||||| |
Sbjct 25619 TTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCC 25560
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACCCTTACTCTA 152119
| || || || |||||||| | |||||| || | || || ||
Sbjct 25559 CTGTAAGTGTTTTCACGAAAATTTGCATTGTAGCGTTTCTGTA 25517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153430446197755
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |