Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq9911 102 2e-16 seq22504 87.8 4e-12 >seq9911 Length=12084 Score = 102 bits (112), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| || || ||||||||||||||||| ||||| | | ||| | |||||||| | Sbjct 5287 ATGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCTTCCAATTG 5346 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || ||||| | | || ||||| | | ||| ||||| || ||||||||||| Sbjct 5347 TTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTT 5406 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 | ||| ||| | || | | || || ||| ||||| | |||||| || || || || Sbjct 5407 TGCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTCTTCCCAGT 5466 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| | |||||| Sbjct 5467 TAATGTCTTGACGAATATCTGCAT 5490 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || || |||||||| || || ||||| || |||||||| | || ||| | |||||||| Sbjct 4826 ACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCTTCC 4885 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 | || || || || || | | || || || | | |||||||||||| |||||| Sbjct 4886 AATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGA 4945 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || ||| ||| ||| | |||| | | || | || |||||||| |||||||| || Sbjct 4946 ATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCCACTTCAAGTGTAATAGTCTTA 5005 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | ||| || || || | |||||| Sbjct 5006 CCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 89.7 bits (98), Expect = 1e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || || ||||| ||||||||||| || ||||| | | || | ||||| || | | Sbjct 4376 TGCAGTGTAGATTCTTTTTGGATATTATAATCTGAAAGCGTGCGGCCATCCTCCAATTGT 4435 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 |||||||| || || | | |||||||| | | || ||||| || ||||| |||||| Sbjct 4436 TTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACCTTCTTTGTCTTGGATTTTT 4495 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||| || | || | | |||| || || ||||| | ||||| ||||| || || Sbjct 4496 GCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAATTGTTTTTCCAGTA 4555 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 ||||| || || |||| |||||| Sbjct 4556 AGAGTTTTTACAAAGATTTGCATT 4579 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| |||||||| || |||||||| || || || | || |||| |||||| Sbjct 5771 AGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATCT 5830 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || |||||||| | | || ||||| | | ||| |||||||| ||| Sbjct 5831 TCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCT 5890 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||||||| ||| || | || | | || || ||| ||||| | ||||| ||| Sbjct 5891 TGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTT 5950 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | || ||||| || | ||||| Sbjct 5951 TTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| |||||||| || |||||||| ||||| || | || || | |||||| Sbjct 5507 AGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCT 5566 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || |||||||| | | || ||||| | | ||| |||||||| ||| Sbjct 5567 TCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCT 5626 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||||||| ||| || | || | | || || ||| ||||| | ||||| ||| Sbjct 5627 TGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTT 5686 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | || || || || | ||||| Sbjct 5687 TTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718 >seq22504 Length=90246 Score = 87.8 bits (96), Expect = 4e-12 Identities = 154/223 (69%), Gaps = 1/223 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || || ||||| || ||||| | || ||| | || ||||| | Sbjct 25738 CAAG-TGCAAAGTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTCTTCCA 25680 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || ||||| ||||| | ||||| || | | ||| |||||||| ||||||| Sbjct 25679 ACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAA 25620 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || ||| | || | | || ||| || || || || || || ||||| | Sbjct 25619 TTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCC 25560 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACCCTTACTCTA 152119 | || || || |||||||| | |||||| || | || || || Sbjct 25559 CTGTAAGTGTTTTCACGAAAATTTGCATTGTAGCGTTTCTGTA 25517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153430446197755