Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 125 6e-24
seq22504 91.5 1e-13
>seq9911
Length=12084
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct 5982 ATGCAAATTTTTGTGAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5923
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| | ||| | |||||| ||||||| ||||| |||||| | || || |||
Sbjct 5922 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5863
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||| | | || | || ||||| |||||||||||| ||| || | || ||||||
Sbjct 5862 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACATTGTCTGACTATAAT 5803
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| ||||| |||||||| || ||||| ||| | ||| | | |||||
Sbjct 5802 ATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGG 5756
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||||||||| ||||| ||||| || ||||||||||| ||||| || || |
Sbjct 5718 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5659
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| | ||| | |||||| ||||||| ||||| |||||| | || || |||
Sbjct 5658 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5599
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||| | | || | || ||||| |||||||||||| || || | || || |||
Sbjct 5598 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGTACATTGTCTGACTACAAT 5539
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| ||||| |||||||| || ||||| ||| | ||| | | |||||
Sbjct 5538 ATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGG 5492
Score = 102 bits (112), Expect = 7e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
||||||||| ||||| ||||| | || || ||||| ||||| | ||| ||||||
Sbjct 4579 AATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAACCATC 4520
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
|| | ||| | || ||| |||||| ||||||||||| | || || ||
Sbjct 4519 GGACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACCA 4460
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
||| | | |||| ||| || ||||||||||| ||| || | | ||||||||
Sbjct 4459 GCAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCAGATTATAA 4400
Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCG 111314
||| ||||||||||||||||| || ||||| |||||
Sbjct 4399 TATCCAAAAAGAATCTACACTGCACTTAGTCTTGCG 4364
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
||||||||||||||| ||||| | || || || |||||||| ||||| ||||||
Sbjct 4807 AATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTC 4748
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
||| || | | | | ||| || || ||||||||||| | || |||||
Sbjct 4747 TGATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCA 4688
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
||| | | |||| ||| || ||||| ||||||||| | ||| | | ||||||||
Sbjct 4687 ACAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAA 4628
Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTG 111312
|| || |||||||| || |||||||| || |||
Sbjct 4627 CATTCAGAAAGAATCCACTCTACATTTGGTATTG 4594
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||||||||| ||||| || || || || ||||| || | ||| |||||
Sbjct 5262 ATGCAAATTTTTGTTAAAACTTTAACTGGAAAGACCATCACTTTAGAAGTTGAACCATCT 5203
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| | ||| | |||||| || || || |||||||| |||| ||||||
Sbjct 5202 GATACCATTGAAAATGTAAAAGCTAAGATCCAGGATAAAGAAGGTATTCCACCTGATCAA 5143
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||| | || || | || || |||||||| |||||| | || | | ||||||||
Sbjct 5142 CAACGACTAATATTCGCTGGTAAACAATTAGAAGATGGTCGTACCCTTTCAGATTATAAC 5083
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| ||||| |||||||| || |||||||| || || || | |||||
Sbjct 5082 ATCCAAAAGGAATCTACCCTTCATTTAGTATTACGATTGAGGGGTGG 5036
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
|||||| || ||||| || || || || || ||||| ||||| ||||| ||||||
Sbjct 6211 AATGCAGATCTTTGTGAAGACTTTAACTGGTAAAACAATTACATTGGAAGTGGAACCTTC 6152
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
|| | | | | |||||| || || ||||||||||| ||||| |||||
Sbjct 6151 AGACACCATCGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCA 6092
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
||| | | || | ||| ||||| |||||||||||| | ||| | | ||||| ||
Sbjct 6091 ACAGCGATTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACTCTATCTGATTACAA 6032
Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTT 111311
||| || ||||| || ||||| ||||| |||||
Sbjct 6031 TATTCAGAAAGAGTCCACACTTCATTTGGTGTT 5999
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| || || ||||| || || || || || || ||||| ||||| ||| ||
Sbjct 5490 ATGCAGATATTCGTCAAGACATTAACTGGGAAGACGATTACTTTGGAAGTGGAGCCATCT 5431
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| || ||| | |||||| ||||||| || |||||||| | || || |||
Sbjct 5430 GATACTATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAA 5371
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||| | | || | ||| || ||||||||||||||| ||| | | ||||||||
Sbjct 5370 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAAC 5311
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| |||||||| || || || ||||| || || || || | |||||
Sbjct 5310 ATCCAAAAAGAGTCGACCCTCCATTTGGTATTACGATTGAGAGGTGG 5264
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| |||||||| ||||| || || || || || ||||| | ||| |||||| |||
Sbjct 5034 ATGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAACC-AGC 4976
Query 111160 -GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
||| | | | | || ||| ||| ||| ||||| ||||| | || ||||||
Sbjct 4975 TGATACCATAGAAAATGTGAAAGCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGATCA 4916
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
|||| | | || | ||| ||||| |||||||||||| | ||| | | ||||| ||
Sbjct 4915 ACAACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAA 4856
Query 111279 TATACAAAAAGAATCTACACTACA 111302
||| ||||| ||||| || || ||
Sbjct 4855 TATTCAAAAGGAATCAACTCTTCA 4832
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||| ||||| || || | || || ||||| || || ||||| |||||
Sbjct 4350 ATGCAAATATTTGTTAAGACCCTTACTGGGAAAACTATCACATTGGAAGTAGAACCTTCA 4291
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| | ||| | || ||| |||||| || |||||||| |||| |||||
Sbjct 4290 GATACAATTGAAAACGTTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCTCCAGATCAG 4231
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
|| | | || | ||| || ||||||||||||||| |||| | | ||||| |||
Sbjct 4230 CAGCGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGGCGAACTCTTTCAGATTACAAT 4171
Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308
|| ||||| |||||||| |||||||| ||
Sbjct 4170 ATTCAAAAGGAATCTACCCTACATTTGGT 4142
>seq22504
Length=90246
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
|||||||||||| || ||||| | || || ||||| || ||| | || |||||
Sbjct 25531 AATGCAAATTTTCGTGAAAACACTTACAGGGAAAACAATAACCCTCGAGGTTGAACCTTC 25590
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
|||| | | | | ||||| |||||| ||||| ||||| | || ||||||
Sbjct 25591 CGATACGATCGAAAATGTAAAGGCTAAAATTCAAGACAAGGAAGGTATCCCACCCGATCA 25650
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
||| | ||||| | || || ||||| |||||||| | ||| | | ||||||||
Sbjct 25651 GCAACGTCTTATATTCGCTGGTAAACAGTTGGAAGACGGTCGTACTCTATCGGATTATAA 25710
Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
||| || || ||||| || | || || ||||||||| || | |||||
Sbjct 25711 TATCCAGAAGGAATCCACTTTGCACTTGGTGTTGCGTTTGAGGGGTGG 25758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421675456542280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |