Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 291 8e-74
>seq1220
Length=9943
Score = 291 bits (322), Expect = 8e-74
Identities = 626/920 (68%), Gaps = 22/920 (2%)
Strand=Plus/Plus
Query 23207 TAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTA 23266
|||| || | |||||| ||||| ||||| | |||| ||||| || || ||||||||
Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216
Query 23267 ATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATA 23326
||||| | | |||||||||||||||||| | |||||| || || ||| ||
Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276
Query 23327 ATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTA 23386
||| || || | || || || |||||||||||||| |||| ||| | | |||| |
Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336
Query 23387 TACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTT--TCAATGGAAACAGC 23444
| ||||||| | || || | ||||| |||||| | | || || || ||| ||
Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGG-TAAGAA-ACTCTTGCTCGATTTCAACCGC 7394
Query 23445 ATCTTTAATTATTTGAACAATA--ACTTCTTCACTAGGTGGATATTTTAAATACTTAAAC 23502
|| ||| || | || || | | | || ||| | | | ||| |||
Sbjct 7395 GTCGCAAATAATATCGACGATTCGAGATTTCGAC--GGTTTTTGTACAATATAAGAAAAT 7452
Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562
||||| || ||||| ||| |||| | |||||||| | || |||||||| || ||
Sbjct 7453 AATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAA 7512
Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622
|||| || ||||| | ||||| ||||| | |||||| |||| |||||| ||||||
Sbjct 7513 GTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAG 7572
Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCAT-TATA 23681
|||||||| || || || || || || || || | ||| ||| || || || | | ||
Sbjct 7573 AAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTA 7632
Query 23682 AT-CAGAAATCCAtttttttGTCCAATTAGCCTTCAATTT---TACACACTCAATTGTTT 23737
| | || |||||| | ||| ||||| || ||| ||| || | |||||
Sbjct 7633 CTGCTGA--TCCATTGCAGGGCCCAGTTAGCTTT---TTTGGCTACGCAAGGTAGTGTTT 7687
Query 23738 CAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797
| || || || || | ||| ||| |||| || | ||||| || ||||| || |
Sbjct 7688 CTATCGCATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCA 7747
Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857
|| |||||||| ||||||||| ||||| ||||| ||||| || |||||||| | |
Sbjct 7748 TGCTGTACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGG 7807
Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCAT 23917
|||||| | |||||| || | | ||| | || | | |||||| ||||| || ||||
Sbjct 7808 CTTCAGTTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCAT 7867
Query 23918 CACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATT 23977
| ||||| || || || | || ||||| ||||||||||| || ||| | |||||
Sbjct 7868 CGGATGCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATT 7927
Query 23978 TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCA 24037
| ||||||| || |||||| | |||||||| ||||| || ||||||||| ||
Sbjct 7928 TATTCCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTT 7987
Query 24038 AGGCACGCTTATACATTAG-CCAAATATCATTATGTTGTATTGGAAATATTACGAATC-T 24095
||| | || || |||| ||||||||| || || |||||| || | || |||| |
Sbjct 7988 CGGCTTGTTTGTA-TTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGT 8046
Query 24096 ATCAGATGATTCTTTAAGAA 24115
| ||| |||||||||||
Sbjct 8047 TTGGGAT-TTTCTTTAAGAA 8065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521315876367000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |