Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1220 291 8e-74 >seq1220 Length=9943 Score = 291 bits (322), Expect = 8e-74 Identities = 626/920 (68%), Gaps = 22/920 (2%) Strand=Plus/Plus Query 23207 TAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTA 23266 |||| || | |||||| ||||| ||||| | |||| ||||| || || |||||||| Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216 Query 23267 ATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATA 23326 ||||| | | |||||||||||||||||| | |||||| || || ||| || Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276 Query 23327 ATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTA 23386 ||| || || | || || || |||||||||||||| |||| ||| | | |||| | Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336 Query 23387 TACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTT--TCAATGGAAACAGC 23444 | ||||||| | || || | ||||| |||||| | | || || || ||| || Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGG-TAAGAA-ACTCTTGCTCGATTTCAACCGC 7394 Query 23445 ATCTTTAATTATTTGAACAATA--ACTTCTTCACTAGGTGGATATTTTAAATACTTAAAC 23502 || ||| || | || || | | | || ||| | | | ||| ||| Sbjct 7395 GTCGCAAATAATATCGACGATTCGAGATTTCGAC--GGTTTTTGTACAATATAAGAAAAT 7452 Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562 ||||| || ||||| ||| |||| | |||||||| | || |||||||| || || Sbjct 7453 AATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAA 7512 Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622 |||| || ||||| | ||||| ||||| | |||||| |||| |||||| |||||| Sbjct 7513 GTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAG 7572 Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCAT-TATA 23681 |||||||| || || || || || || || || | ||| ||| || || || | | || Sbjct 7573 AAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTA 7632 Query 23682 AT-CAGAAATCCAtttttttGTCCAATTAGCCTTCAATTT---TACACACTCAATTGTTT 23737 | | || |||||| | ||| ||||| || ||| ||| || | ||||| Sbjct 7633 CTGCTGA--TCCATTGCAGGGCCCAGTTAGCTTT---TTTGGCTACGCAAGGTAGTGTTT 7687 Query 23738 CAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797 | || || || || | ||| ||| |||| || | ||||| || ||||| || | Sbjct 7688 CTATCGCATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCA 7747 Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857 || |||||||| ||||||||| ||||| ||||| ||||| || |||||||| | | Sbjct 7748 TGCTGTACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGG 7807 Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCAT 23917 |||||| | |||||| || | | ||| | || | | |||||| ||||| || |||| Sbjct 7808 CTTCAGTTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCAT 7867 Query 23918 CACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATT 23977 | ||||| || || || | || ||||| ||||||||||| || ||| | ||||| Sbjct 7868 CGGATGCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATT 7927 Query 23978 TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCA 24037 | ||||||| || |||||| | |||||||| ||||| || ||||||||| || Sbjct 7928 TATTCCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTT 7987 Query 24038 AGGCACGCTTATACATTAG-CCAAATATCATTATGTTGTATTGGAAATATTACGAATC-T 24095 ||| | || || |||| ||||||||| || || |||||| || | || |||| | Sbjct 7988 CGGCTTGTTTGTA-TTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGT 8046 Query 24096 ATCAGATGATTCTTTAAGAA 24115 | ||| ||||||||||| Sbjct 8047 TTGGGAT-TTTCTTTAAGAA 8065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521315876367000