Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq9911 138 8e-28 seq22544 105 5e-18 >seq9911 Length=12084 Score = 138 bits (152), Expect = 8e-28 Identities = 173/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||| ||||||| ||||| ||| ||| || || || ||||| Sbjct 5977 TTGCATACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTA 6036 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || ||| | || |||| ||||| |||||||||||||| ||||| ||||| Sbjct 6037 ATCAGATAGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATC 6096 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | |||||| || ||| ||||| |||| | ||| | |||||||| | | Sbjct 6097 TGGGGGAATACCTTCTTTGTCCTGGATCTT-AGCTTTTACATTCTCGATGGTGTCTGAAG 6155 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| |||| ||||| || || || || | |||||||| ||||| ||||| Sbjct 6156 GTTCCACTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCAT 6210 Score = 125 bits (138), Expect = 5e-24 Identities = 173/238 (73%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || ||||||| || ||| || | ||| || || || |||||||| || Sbjct 4342 TATTTGCATACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATT 4401 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||||| | || ||| | || |||| || ||||||||||| |||||||| ||||| Sbjct 4402 ATAATCTGAAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTG 4461 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGG 44279 |||| ||| | |||||| || || || || ||||| || | || | |||||||| | Sbjct 4462 GTCTGGAGGTATACCTTCTTTGTCTTGGAT-TTTTGCTTTAACGTTTTCAATGGTGTCCG 4520 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||||| || | ||||| || ||||| || || || || || ||||||||||| Sbjct 4521 ATGGTTCCACTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCAT 4578 Score = 120 bits (132), Expect = 2e-22 Identities = 169/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||||| | || ||||||||||| || |||||||| || ||||| Sbjct 4801 TTGCATTCCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTA 4860 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || ||| | || |||| ||||| || ||||| |||||||| || ||||| Sbjct 4861 ATCTGATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATC 4920 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC-TTCAATGTTCCTATGGTGTCGGCGG 44282 | ||| | |||||||| || ||||| ||| |||| || ||||||| || || | Sbjct 4921 GGGAGGGATTCCTTCCTTGTCTTGAATCTT-TGCTTTCACATTTTCTATGGTATCAGCTG 4979 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || | ||||| ||||| || || | || || || || || ||||| Sbjct 4980 GTTCCACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 107 bits (118), Expect = 1e-18 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 |||||||| || |||||||| | ||||| ||| | || |||| || || || |||| Sbjct 4160 TCCTTTTGAATATTGTAATCTGAAAGAGTT--CGCCCATCTTCCAATTGTTTTCCTGCAA 4217 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 ||||||||||||||||||||| ||| | |||||| || ||| | | || |||| || | Sbjct 4218 AGATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTATCC-TGAATTTTAGCTTTAACG 4276 Query 44265 -TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 || | || || || | | ||| || |||| || || || || || || |||||||| Sbjct 4277 TTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTGATAGTTTTCCCAGTAAGGGTCTTA 4336 Query 44324 ACGAAGATTTGCAT 44337 || || |||||||| Sbjct 4337 ACAAATATTTGCAT 4350 Score = 105 bits (116), Expect = 5e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||| | |||||| |||| || || ||| || || || ||||| || Sbjct 4573 TTGCATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATA 4632 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | | || | || |||| ||| || || ||||| || |||||||| ||||| Sbjct 4633 ATCAGATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATC 4692 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || ||| | ||||| || || ||||| |||| ||| | || || || | | Sbjct 4693 TGGAGGTATTCCTTCTTTGTCTTGGATCTTA-GCTTTGGCATTCTCGATAGTATCAGAAG 4751 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| |||| ||||| ||||||||||| || || ||||| || |||||||| Sbjct 4752 GTTCCACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCAT 4806 Score = 93.3 bits (102), Expect = 3e-14 Identities = 163/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| || || |||| || || || ||| ||||||||||| || Sbjct 5257 TTGCATACCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATA 5316 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || | || |||| || || || |||||||||||||| || || || Sbjct 5317 ATCAGAAAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTC 5376 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC-TTCAATGTTCCTATGGTGTCGGCGG 44282 || || | ||||| |||| | | | || ||| || | || | || || || | | Sbjct 5377 TGGTGGGATACCTT-CTTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATCAGATG 5435 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| |||| ||||||||||| || || | ||||| ||||| || ||||| Sbjct 5436 GCTCCACTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490 >seq22544 Length=59602 Score = 105 bits (116), Expect = 5e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 46981 GATGTTTCCTAGATCGCCCAGGTGACGTTCGGCGGAGTTCGGGCCGCCGTGATCGCGATG 47040 |||||| || | |||||| | ||||||| || | | | || ||||||||||| | Sbjct 43442 GATGTTCCCCAAATCGCCGACGTGACGTACGTCTGCTTCTGGTCCGCCGTGATCCTTACT 43501 Query 47041 GTGAGGATTGAAGTGTTCGCCCGCCGAGGTGCAGCCGTTGGTCGTATCACCGAATTCGTG 47100 |||||| |||||||| |||| || || ||||||||||||| |||| ||||||||||| Sbjct 43502 GTGAGGGTTGAAGTGGGCGCCGGCTGAAATGCAGCCGTTGGTGTTATCGCCGAATTCGTG 43561 Query 47101 AATGTGAATACCGTGA 47116 |||||| | |||||| Sbjct 43562 AATGTGGAATCCGTGA 43577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359874551151885