Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq1351 131 1e-25
>seq1351
Length=133559
Score = 131 bits (144), Expect = 1e-25
Identities = 240/350 (69%), Gaps = 10/350 (3%)
Strand=Plus/Plus
Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848
|| ||| | || ||| | || || || || ||| | |||| ||||| ||||||||||||
Sbjct 104230 GGTGACTTAGGTCCCGTATATGGTTTTCAATGGCGTCATTACGGAGCTGAATATAAAGAC 104289
Query 18849 -TGTCAATCAAACTATTTACA----GCAAGGAATCGATCAGCTGCAAACTGTTATAGATA 18903
||| ||| ||||| ||||||| ||||| || ||| | | || | |
Sbjct 104290 ATGT-----TTACTGATTACACTGGTAAAGGAATAGATCAACTTCAAGATATCATCAACA 104344
Query 18904 CAATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATA 18963
||||||||| || ||| | || ||||| || || | |||||||||| | |||
Sbjct 104345 CAATTAAAAACAATCCAAATGATCGTCGAATCATAATGTGTGCTTGGAATCCTATCGATC 104404
Query 18964 TCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTG 19023
| || ||||| ||| || || ||||| ||| |||||| || || || || | |
Sbjct 104405 TACCAAAAATGGCACTTCCACCTTGTCATTGTTTAGCTCAGTTCTATGTAGCTAATGATA 104464
Query 19024 AATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACA 19083
||||||| || ||| |||| || ||||| | |||||||| | || || || || || |
Sbjct 104465 AATTATCGTGTCAATTATATCAAAGATCTGCTGATATGGGTTTAGGTGTGCCATTTAATA 104524
Query 19084 TTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTT 19133
||||| | ||| || | || || || || | || ||||| |||||||||
Sbjct 104525 TTGCTAGTTATTCATTACTGACTTATATGATTGCACATGTCACAGGACTT 104574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399391600173825
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |