Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1351 131 1e-25 >seq1351 Length=133559 Score = 131 bits (144), Expect = 1e-25 Identities = 240/350 (69%), Gaps = 10/350 (3%) Strand=Plus/Plus Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848 || ||| | || ||| | || || || || ||| | |||| ||||| |||||||||||| Sbjct 104230 GGTGACTTAGGTCCCGTATATGGTTTTCAATGGCGTCATTACGGAGCTGAATATAAAGAC 104289 Query 18849 -TGTCAATCAAACTATTTACA----GCAAGGAATCGATCAGCTGCAAACTGTTATAGATA 18903 ||| ||| ||||| ||||||| ||||| || ||| | | || | | Sbjct 104290 ATGT-----TTACTGATTACACTGGTAAAGGAATAGATCAACTTCAAGATATCATCAACA 104344 Query 18904 CAATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATA 18963 ||||||||| || ||| | || ||||| || || | |||||||||| | ||| Sbjct 104345 CAATTAAAAACAATCCAAATGATCGTCGAATCATAATGTGTGCTTGGAATCCTATCGATC 104404 Query 18964 TCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTG 19023 | || ||||| ||| || || ||||| ||| |||||| || || || || | | Sbjct 104405 TACCAAAAATGGCACTTCCACCTTGTCATTGTTTAGCTCAGTTCTATGTAGCTAATGATA 104464 Query 19024 AATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACA 19083 ||||||| || ||| |||| || ||||| | |||||||| | || || || || || | Sbjct 104465 AATTATCGTGTCAATTATATCAAAGATCTGCTGATATGGGTTTAGGTGTGCCATTTAATA 104524 Query 19084 TTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTT 19133 ||||| | ||| || | || || || || | || ||||| ||||||||| Sbjct 104525 TTGCTAGTTATTCATTACTGACTTATATGATTGCACATGTCACAGGACTT 104574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399391600173825