Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq93 134 1e-26
seq8065 111 2e-19
seq5 89.7 5e-13
>seq93
Length=855823
Score = 134 bits (148), Expect = 1e-26
Identities = 171/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744
|||| ||||| || || || || || | || |||||||| |||||| | || || |||
Sbjct 276594 GAAATATGCAGATCTTTGTGAAGACTTTGACTGGCAAAACAATCACCCTTGAAGTAGAAC 276653
Query 40745 CCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCG 40803
|| | |||| | | | |||| |||| | ||||| | ||||| ||||| ||||| |
Sbjct 276654 CCTCAGACACCATCGAGAACG-TCAAAGCTAAAATCCAAGACAAGGAGGGAATCCCACCC 276712
Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863
||||| ||||| || || | ||| || ||||| |||| |||| || ||||| ||||
Sbjct 276713 GACCAACAACGTCTGATTTTCGCCGGAAAACAATTGGAGGACGGCCGTACCCTATCCGAC 276772
Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||| ||||| |||| || ||| | |||||||| | ||||| ||
Sbjct 276773 TACAACATCCAAAAGGAATCCACCCTCCATTTGGTGTTGCGTCTCAGGGGAGG 276825
>seq8065
Length=22102
Score = 111 bits (122), Expect = 2e-19
Identities = 136/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 40719 CAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAAAAAAT 40778
||||||||||||| | || || ||| || |||||| | | | |||| | |||||
Sbjct 20007 CAAAACCATCACCCTTGAAGTGGAACCCTCCGACACCACCGATAATGTCAAAGCTAAAAT 20066
Query 40779 TCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCT 40838
|| ||||||||||| ||||| | ||||| ||||| || || | |||||| ||||| |
Sbjct 20067 TCAAGACAAAGAGGGAATCCCTCCCGACCAACAACGTCTGATTTTCGCGGGAAAACATTT 20126
Query 40839 GGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| ||| || ||||| ||| ||||||||||| ||||| |||| | ||| | ||
Sbjct 20127 GGTTAGCGACCGTACCCTATCCGATTACAACATCCAAAAGGAATCCACAATTCATTTGGT 20186
Query 40899 GTTGCG 40904
||||||
Sbjct 20187 GTTGCG 20192
>seq5
Length=1739417
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || ||||| || |||||||| || | || || ||| |
Sbjct 581865 AAGATGCAGATTTTCGTGAAGACCCTCACCGGAAAAACCATTACTTTGGAAGTTGAACCT 581924
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | ||| | || | || || | |||||||| ||||| || | ||
Sbjct 581925 TCCGACACTATCGAAAATGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCACCCGAT 581984
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| || || | |||| || || |||||| |||| || | || || || ||||||
Sbjct 581985 CAACAGCGTTTGATCTTTGCTGGTAAACAGTTGGAAGATGGACGTACTCTTTCAGACTAC 582044
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCT 40895
||||| ||||| ||| |||| || |||||
Sbjct 582045 AACATTCAGAAAGAGTCCACCCTCCATCT 582073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515070527059600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |