Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq93 134 1e-26 seq8065 111 2e-19 seq5 89.7 5e-13 >seq93 Length=855823 Score = 134 bits (148), Expect = 1e-26 Identities = 171/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 |||| ||||| || || || || || | || |||||||| |||||| | || || ||| Sbjct 276594 GAAATATGCAGATCTTTGTGAAGACTTTGACTGGCAAAACAATCACCCTTGAAGTAGAAC 276653 Query 40745 CCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCG 40803 || | |||| | | | |||| |||| | ||||| | ||||| ||||| ||||| | Sbjct 276654 CCTCAGACACCATCGAGAACG-TCAAAGCTAAAATCCAAGACAAGGAGGGAATCCCACCC 276712 Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863 ||||| ||||| || || | ||| || ||||| |||| |||| || ||||| |||| Sbjct 276713 GACCAACAACGTCTGATTTTCGCCGGAAAACAATTGGAGGACGGCCGTACCCTATCCGAC 276772 Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||| ||||| |||| || ||| | |||||||| | ||||| || Sbjct 276773 TACAACATCCAAAAGGAATCCACCCTCCATTTGGTGTTGCGTCTCAGGGGAGG 276825 >seq8065 Length=22102 Score = 111 bits (122), Expect = 2e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 40719 CAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAAAAAAT 40778 ||||||||||||| | || || ||| || |||||| | | | |||| | ||||| Sbjct 20007 CAAAACCATCACCCTTGAAGTGGAACCCTCCGACACCACCGATAATGTCAAAGCTAAAAT 20066 Query 40779 TCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCT 40838 || ||||||||||| ||||| | ||||| ||||| || || | |||||| ||||| | Sbjct 20067 TCAAGACAAAGAGGGAATCCCTCCCGACCAACAACGTCTGATTTTCGCGGGAAAACATTT 20126 Query 40839 GGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || ||| || ||||| ||| ||||||||||| ||||| |||| | ||| | || Sbjct 20127 GGTTAGCGACCGTACCCTATCCGATTACAACATCCAAAAGGAATCCACAATTCATTTGGT 20186 Query 40899 GTTGCG 40904 |||||| Sbjct 20187 GTTGCG 20192 >seq5 Length=1739417 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || ||||| || |||||||| || | || || ||| | Sbjct 581865 AAGATGCAGATTTTCGTGAAGACCCTCACCGGAAAAACCATTACTTTGGAAGTTGAACCT 581924 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | ||| | || | || || | |||||||| ||||| || | || Sbjct 581925 TCCGACACTATCGAAAATGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCACCCGAT 581984 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || || || | |||| || || |||||| |||| || | || || || |||||| Sbjct 581985 CAACAGCGTTTGATCTTTGCTGGTAAACAGTTGGAAGATGGACGTACTCTTTCAGACTAC 582044 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||| ||||| ||| |||| || ||||| Sbjct 582045 AACATTCAGAAAGAGTCCACCCTCCATCT 582073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515070527059600