Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1351 167 2e-36 >seq1351 Length=133559 Score = 167 bits (184), Expect = 2e-36 Identities = 247/342 (72%), Gaps = 6/342 (2%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||||||| || |||||| |||| | || ||||| |||||||| ||||| ||||| ||| Sbjct 104567 GTGACATGTGCAATCATATAAGTCAGTAATGAATAACTAGCAATATTAAATGGCACACCT 104508 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 | ||||||||||| |||||||||||||| ||||| || | || ||| | ||||| Sbjct 104507 AAACCCATATCAGCAGATCTTTGATATAATTGACACGATAATTTATCATTAGCTACATAG 104448 Query 97237 AACTGA-CTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCA 97295 |||||| || || | |||||| || || | ||||||||||| | ||| | |||||| Sbjct 104447 AACTGAGCTAAACA-ATGACAAGGTGGAAGTGCCATTTTTGGTAGATCGATAGGATTCCA 104389 Query 97296 AGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTT 97355 ||||||||| | |||| | ||| |||| || | | || || || || || | ||| Sbjct 104388 AGCACACATTATGATTCGACGATCATTTGGATTGTTTTTAATTGTGTTGATGATAT-CTT 104330 Query 97356 TAA-TTGATCAACGCCTTCTCCACCATAAT-TGTGCTTAAGACCTTGATATTCTGCTCCA 97413 || |||||| | |||| ||| |||| || | | ||| |||||| ||||| Sbjct 104329 GAAGTTGATCTATTCCTTTACCAGTGTAATCAGTAAACATG-TCTTTATATTCAGCTCCG 104271 Query 97414 AAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 |||| | |||||| || ||||| || || || | ||| ||| Sbjct 104270 TAATGACGCCATTGAAAACCATATACGGGACCTAAGTCACCT 104229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346686432863450