Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq93 118 9e-22 seq5 100 2e-16 seq8065 98.7 9e-16 seq259 84.2 2e-11 >seq93 Length=855823 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||||||||| |||| || || || ||||| |||||||| ||| | || || || Sbjct 276811 CAACACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGATAGGGTACGGCCGTC 276752 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| | |||||||| ||| | || ||||| || || ||||| || || ||||||||||| Sbjct 276751 CTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTC 276692 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | ||||| ||| || | |||| |||||| | | || || || | ||| | || Sbjct 276691 TTGGATTTTAGCTTTGACGTTCTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGATTGT 276632 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| |||| ||| || ||||| |||||||| Sbjct 276631 TTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 276599 >seq5 Length=1739417 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || |||||||| ||||||||||| || | ||| || ||| || | |||| Sbjct 582070 TGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAACTGT 582011 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || ||||| |||| | |||||| |||||||| || ||||| || |||||| || || Sbjct 582010 TTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTTG 581951 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||| || | ||||| ||||| | || || || | || | ||||| ||||| Sbjct 581950 GCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCGGTG 581891 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 || || || || ||||||||||| Sbjct 581890 AGGGTCTTCACGAAAATCTGCAT 581868 >seq8065 Length=22102 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 7/231 (3%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | | | ||||||||| || ||||| || || ||||| |||||||||||| Sbjct 20206 TACCTCCTCCGAGACGCAACACCAAATGAATTGTGGATTCCTTTTGGATGTTGTAATCG- 20148 Query 118570 TCATAGTGCGCGTATCCT--CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627 |||| | || || | | |||||||| ||| | || ||||| || || ||||| Sbjct 20147 -GATAGGGTACGGTCGCTAACCAAATGTTTTCCCGCGAAAATCAGACGTTGTTGGTCGGG 20089 Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTC 118687 ||| || ||||| |||||| |||||| ||| || | ||| |||||| | | || Sbjct 20088 AGGGATTCCCTCTTTGTCTTGAATTTTAGCTTTGACATTATCGGTGGTGTCGGAGGGTTC 20029 Query 118688 GACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || | ||| | |||||| | ||| | ||||||| |||||||| Sbjct 20028 CACTTCAAGGGTGATGGTTTTGTCATTCA---ATGTTACAAAGATCTGCAT 19981 >seq259 Length=588930 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608 ||||||||||||||||||| | ||| | ||| || | |||||||| || ||| Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468 Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668 | | | || ||||| || || || || || || ||| |||||| || || | || Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 | | ||||| | ||| ||||| | ||| | ||||| || |||| |||||| |||| Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348 Query 118729 AAATCTGCATG 118739 | ||||||||| Sbjct 399347 AGATCTGCATG 399337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433708342494820