Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq93 118 9e-22
seq5 100 2e-16
seq8065 98.7 9e-16
seq259 84.2 2e-11
>seq93
Length=855823
Score = 118 bits (130), Expect = 9e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
||||||||| |||| || || || ||||| |||||||| ||| | || || ||
Sbjct 276811 CAACACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGATAGGGTACGGCCGTC 276752
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| | |||||||| ||| | || ||||| || || ||||| || || |||||||||||
Sbjct 276751 CTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTC 276692
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||||| ||| || | |||| |||||| | | || || || | ||| | ||
Sbjct 276691 TTGGATTTTAGCTTTGACGTTCTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGATTGT 276632
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| |||| ||| || ||||| ||||||||
Sbjct 276631 TTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 276599
>seq5
Length=1739417
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || |||||||| ||||||||||| || | ||| || ||| || | ||||
Sbjct 582070 TGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAACTGT 582011
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| ||||| |||| | |||||| |||||||| || ||||| || |||||| || ||
Sbjct 582010 TTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTTG 581951
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||| || | ||||| ||||| | || || || | || | ||||| |||||
Sbjct 581950 GCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCGGTG 581891
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
|| || || || |||||||||||
Sbjct 581890 AGGGTCTTCACGAAAATCTGCAT 581868
>seq8065
Length=22102
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/231 (70%), Gaps = 7/231 (3%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| | | | ||||||||| || ||||| || || ||||| ||||||||||||
Sbjct 20206 TACCTCCTCCGAGACGCAACACCAAATGAATTGTGGATTCCTTTTGGATGTTGTAATCG- 20148
Query 118570 TCATAGTGCGCGTATCCT--CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627
|||| | || || | | |||||||| ||| | || ||||| || || |||||
Sbjct 20147 -GATAGGGTACGGTCGCTAACCAAATGTTTTCCCGCGAAAATCAGACGTTGTTGGTCGGG 20089
Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTC 118687
||| || ||||| |||||| |||||| ||| || | ||| |||||| | | ||
Sbjct 20088 AGGGATTCCCTCTTTGTCTTGAATTTTAGCTTTGACATTATCGGTGGTGTCGGAGGGTTC 20029
Query 118688 GACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | ||| | |||||| | ||| | ||||||| ||||||||
Sbjct 20028 CACTTCAAGGGTGATGGTTTTGTCATTCA---ATGTTACAAAGATCTGCAT 19981
>seq259
Length=588930
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608
||||||||||||||||||| | ||| | ||| || | |||||||| || |||
Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468
Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668
| | | || ||||| || || || || || || ||| |||||| || || | ||
Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408
Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
| | ||||| | ||| ||||| | ||| | ||||| || |||| |||||| ||||
Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348
Query 118729 AAATCTGCATG 118739
| |||||||||
Sbjct 399347 AGATCTGCATG 399337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433708342494820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |