Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq93 98.7 6e-16 seq5 89.7 3e-13 >seq93 Length=855823 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| || || |||||||||||||| || |||| |||| ||||| || || || ||||| Sbjct 276790 TTCCTTTTGGATGTTGTAGTCGGATAGGGTACGGCCGTCCTCCAATTGTTTTCCGGCGAA 276731 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316 ||| || || || |||||| || | | ||||||||| || ||| ||||| | | Sbjct 276730 AATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGGAT-TTTAGCTTTGACGT 276672 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | || | || | | ||| || || | ||||| |||||||| || | ||| |||| Sbjct 276671 TCTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGATTGTTTTGCCAGTCAAAGTCTTCA 276612 Query 34377 CAAAGATCTGCAT 34389 ||||||||||||| Sbjct 276611 CAAAGATCTGCAT 276599 >seq5 Length=1739417 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| ||||||||||| || || ||| | || |||||||| || || || || Sbjct 582058 TCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAACTGTTTACCAGCAAAG 581999 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | ||||| || ||| || | || || ||||| ||||| |||| || Sbjct 581998 ATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACATTT 581939 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| | ||| || |||| || |||||||| |||||||| || ||||| Sbjct 581938 TCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCGGTGAGGGTCTTCACG 581879 Query 34379 AAGATCTGCATC 34390 || ||||||||| Sbjct 581878 AAAATCTGCATC 581867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322981104197600