Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq1351 136 5e-27 seq2275 91.5 2e-13 >seq1351 Length=133559 Score = 136 bits (150), Expect = 5e-27 Identities = 191/270 (71%), Gaps = 15/270 (6%) Strand=Plus/Plus Query 104479 GGTATAGATCAACTCAAAAATATTATTACAACAATTCAAAATGAACCTTGGGATAGAAGA 104538 || ||||||||||| || |||| || | |||||| |||| | || ||| | || Sbjct 104314 GGAATAGATCAACTTCAAGATATCATCAACACAATTAAAAACAATCCAAATGATCGTCGA 104373 Query 104539 ATGATATTATTAGCTTGGAACCCAAAGGATAATTCTAAAATGGCACTTCCTCCTTGTCAT 104598 || ||| | | |||||||| || | ||| | |||||||||||||| ||||||||| Sbjct 104374 ATCATAATGTGTGCTTGGAATCCTATCGATCTACCAAAAATGGCACTTCCACCTTGTCAT 104433 Query 104599 TGTATAGCACATTTTGATGTAAGTTCAAAAATAAATGGTAAAAGAGAATTGTCTTGTCAT 104658 ||| |||| || || ||||| | |||| |||| || || ||||| Sbjct 104434 TGTTTAGCTCAGTTCTATGTAGCT---------AATGATAAA------TTATCGTGTCAA 104478 Query 104659 TTATTTCAAAGATCTGCAGATATGGGGTTGGGAGTTCCTTTTAACATAGCAAGTTATGCA 104718 |||| |||||||||||| |||||||| || || || || ||||| || || |||||| || Sbjct 104479 TTATATCAAAGATCTGCTGATATGGGTTTAGGTGTGCCATTTAATATTGCTAGTTATTCA 104538 Query 104719 TTATTAACACATATAATAGCTCATGTCTCA 104748 ||| | || |||| || || |||||| || Sbjct 104539 TTACTGACTTATATGATTGCACATGTCACA 104568 Score = 84.2 bits (92), Expect = 3e-11 Identities = 180/268 (67%), Gaps = 11/268 (4%) Strand=Plus/Plus Query 104101 ATTAATAATGAAGAAAAACAATATTTAAATTTATTAGAAAAAGTTCTTTTTCAAGGCG-- 104158 || || | ||| || |||||||| | ||| ||||||| ||| || || |||| | Sbjct 102985 ATCAAAACTGATGAGGAACAATATCTTAATCTATTAGACAAAATTATTAAGGAAGGTGTT 103044 Query 104159 --AAGATCGTGACGATAGAACAGGAATTGGAACTAAAAATGTATTTGGAGAACAATTAAA 104216 || ||| || ||||||| | || |||| | | ||||| | |||| | | Sbjct 103045 AAAAAATCA----GACCGAACAGGTGTAGGCACTATTTCTTTGTTTGGTGCACAAATGAG 103100 Query 104217 ATTTAATTTAAGAAC---ATCTTTTCCGTTACTAACTACaaaaaaaGTTTTTTGGAAAGG 104273 |||| || || || | ||||| ||||| |||||||||| ||| ||||||||||| Sbjct 103101 ATTTGATCTATCAAATGAAGTATTTCCATTACTCACTACAAAAAGAGTATTTTGGAAAGG 103160 Query 104274 AGTTGTAGAAGAACTCTTATGGTTTATTAGCGGGAGTACAGATGTTTCTGTATTAAATCA 104333 |||||| |||||| | | |||||||| | || |||| ||| | | | | | Sbjct 103161 AGTTGTTGAAGAATTACTTTGGTTTATCAAAGGTTCTACAAATGCGAAGGAACTTTCTGA 103220 Query 104334 AAAAGGAGTTAAAATTTGGAATAAAAAT 104361 ||||| || ||||||||| || |||| Sbjct 103221 TAAAGGTGTAAAAATTTGGGATCCAAAT 103248 >seq2275 Length=69902 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/153 (75%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 189297 AGTCATTCTACTTGGTAAACAATGTGGATTGATGATCATATCAGGGATAGA-ACCATCTT 189355 |||||||| |||||| | | ||| || || || || ||||| || | ||| |||| || Sbjct 33593 AGTCATTCGACTTGGATATCCATGAGGGTTCATAATAATATCTGG-ACAGATACCACTTT 33651 Query 189356 CCATAAAAGGCATGTCAACTTCTTCTAAAATCATTCCAACGGTTCCTTTTTGTGCCATTG 189415 | |||||||||| || ||| ||||| ||| | ||||| ||||| ||| || | Sbjct 33652 CATTAAAAGGCATATCTTCTTGTTCTACAATAAGTCCAATTACACCTTTCTGT-CCGTGA 33710 Query 189416 C-ACTGCAAAATTTATCACCAATTTCTGGTCTT 189447 | ||| | ||||||||||||||||||||||||| Sbjct 33711 CGACTACTAAATTTATCACCAATTTCTGGTCTT 33743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679618231057200