Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq259 123 2e-23
seq207 89.7 4e-13
seq93 82.4 6e-11
>seq259
Length=588930
Score = 123 bits (136), Expect = 2e-23
Identities = 143/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 18136 CTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGA 18195
|||||||||||||||| || | | ||| | | |||||| |||||||| || ||| |||
Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468
Query 18196 TAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTG 18255
| | |||||||||||| || | ||||| ||||| ||||| |||||| | |
Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408
Query 18256 CAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAA 18315
||| |||||| | ||||| |||| ||||||| |||| || ||||| ||||| ||||
Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348
Query 18316 AAATTTGCATTTT 18328
| || ||||| ||
Sbjct 399347 AGATCTGCATGTT 399335
>seq207
Length=511460
Score = 89.7 bits (98), Expect = 4e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| || |||| ||| | ||||| || ||||| ||||||||||||||||| ||||| |
Sbjct 361877 TCCACCACGTAATCTCAATACCAAATGGAGTGTGGATTCTTTTTGAATGTTATAGTCAGA 361936
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211
| ||||| |||||| |||||||| || || ||||||||| || |||||
Sbjct 361937 TAGGGTTTTGTCATCTTCTAATTGTTTTCCGGCGAAGATAAGTCGCTGCTGATC 361990
>seq93
Length=855823
Score = 82.4 bits (90), Expect = 6e-11
Identities = 165/242 (68%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 18089 TTTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTT 18148
|| ||| | |||||||| || | | |||| || || || ||||| ||||| |||||
Sbjct 276835 TTATTGCTTTCCTCCCCTGAGACGCAACACCAAATGGAGGGTGGATTCCTTTTGGATGTT 276776
Query 18149 GTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTG 18208
|||||||| | || | || ||||||||||| || || | || || | ||||||
Sbjct 276775 GTAGTCGGATAGGGTACGGCCGTCCTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTG 276716
Query 18209 ATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCAC 18267
|| || | || ||||| || |||| | || ||||| | | | |||||
Sbjct 276715 GTCGGGTGGGATTCCCTCCTTGTCTTGGATTT-TAGCTTTGACGTTCTCGATGGTGTCTG 276657
Query 18268 CGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTT 18327
||| || ||||| |||||| ||||||| ||||| || || ||||| || ||||| |
Sbjct 276656 AGGGTTCTACTTCAAGGGTGATTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCATAT 276597
Query 18328 TT 18329
||
Sbjct 276596 TT 276595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379237272158325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |