Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq259 123 2e-23 seq207 89.7 4e-13 seq93 82.4 6e-11 >seq259 Length=588930 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 18136 CTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGA 18195 |||||||||||||||| || | | ||| | | |||||| |||||||| || ||| ||| Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468 Query 18196 TAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTG 18255 | | |||||||||||| || | ||||| ||||| ||||| |||||| | | Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408 Query 18256 CAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAA 18315 ||| |||||| | ||||| |||| ||||||| |||| || ||||| ||||| |||| Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348 Query 18316 AAATTTGCATTTT 18328 | || ||||| || Sbjct 399347 AGATCTGCATGTT 399335 >seq207 Length=511460 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || |||| ||| | ||||| || ||||| ||||||||||||||||| ||||| | Sbjct 361877 TCCACCACGTAATCTCAATACCAAATGGAGTGTGGATTCTTTTTGAATGTTATAGTCAGA 361936 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 | ||||| |||||| |||||||| || || ||||||||| || ||||| Sbjct 361937 TAGGGTTTTGTCATCTTCTAATTGTTTTCCGGCGAAGATAAGTCGCTGCTGATC 361990 >seq93 Length=855823 Score = 82.4 bits (90), Expect = 6e-11 Identities = 165/242 (68%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 18089 TTTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTT 18148 || ||| | |||||||| || | | |||| || || || ||||| ||||| ||||| Sbjct 276835 TTATTGCTTTCCTCCCCTGAGACGCAACACCAAATGGAGGGTGGATTCCTTTTGGATGTT 276776 Query 18149 GTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTG 18208 |||||||| | || | || ||||||||||| || || | || || | |||||| Sbjct 276775 GTAGTCGGATAGGGTACGGCCGTCCTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTG 276716 Query 18209 ATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCAC 18267 || || | || ||||| || |||| | || ||||| | | | ||||| Sbjct 276715 GTCGGGTGGGATTCCCTCCTTGTCTTGGATTT-TAGCTTTGACGTTCTCGATGGTGTCTG 276657 Query 18268 CGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTT 18327 ||| || ||||| |||||| ||||||| ||||| || || ||||| || ||||| | Sbjct 276656 AGGGTTCTACTTCAAGGGTGATTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCATAT 276597 Query 18328 TT 18329 || Sbjct 276596 TT 276595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379237272158325