Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq86 156 4e-33 >seq86 Length=611229 Score = 156 bits (172), Expect = 4e-33 Identities = 231/321 (72%), Gaps = 10/321 (3%) Strand=Plus/Plus Query 37041 ATGTTGAATAGAACCATTATGTAACA-CAATTGTATTCTTTATGTCATTATTCCACATAT 37099 || ||||| |||||||||| || | |||||| || ||| |||| | || ||| || Sbjct 223770 ATCTTGAACGGAACCATTATTTACAATCAATTG-ATCCTTCATGTTGTCATCCCA--TAG 223826 Query 37100 TTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAA 37157 | | | || | | |||||||| || || |||| ||||| ||||| ||||| || || Sbjct 223827 TCCCAATTCAACCAAATCTCTCAACAGATGATGATTAACAACTTGAAATTCTCCCGACAA 223886 Query 37158 TACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATAT 37217 ||||||| | || ||||| ||||||||||||| || ||||| || | ||| || Sbjct 223887 AACTCTTCGAGAGTAAATATTTGATGTATATGGTTCAAATGATTCATTGTTTCCTAAAAT 223946 Query 37218 TTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGT 37277 ||| | ||| || ||||| ||||| ||||| || ||||| ||| | | || ||| Sbjct 223947 TTGTGCTGTGGAAGCAGTTGGCATAGGTGCCATAAGAAGAGAATTACGAACGCCGTGTTG 224006 Query 37278 ATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT--CTTTAACCAC 37335 | | ||| | | ||||| | | ||||||||| | |||||||||| | | || |||| Sbjct 224007 ACTGATTTTTTCTTTTAATGCTGCCCAATCCCAGAGATCTGTTGGGGTAACATT--CCAC 224064 Query 37336 ATATCATATTGTAGAATACCT 37356 |||||||||||||| |||||| Sbjct 224065 ATATCATATTGTAGGATACCT 224085 Score = 111 bits (122), Expect = 1e-19 Identities = 174/249 (70%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 37917 TTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACA 37976 |||||||| | | || | | | ||| || | ||||| ||||| ||||||||||| Sbjct 232734 TTCGTATTTTCTGTAGAGTGCATCAAATTCGTCACCCCAGCAATCGCTCAATCCTGGACA 232793 Query 37977 TTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATC 38036 | | |||||||| | | ||| | ||||| |||||| ||| ||||||| ||| Sbjct 232794 TCTGTTCGGACACATCAAACTCCAAGTTCCATCTGATTCTACTCGTCTCATAAATTCATC 232853 Query 38037 AGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTT 38096 |||| ||| | ||| |||||||||| | |||| | ||||| || || |||||| Sbjct 232854 GGGTATCCAAAGAGCATAAAATAAATCTCGAGCTCTAAACTCTTCTTTTCCCGTATTCTT 232913 Query 38097 TCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGC 38156 | |||| || ||| || || ||||| | ||||||||||| | |||||| | | || Sbjct 232914 TTTTAAATCTAAAAATTCAAAAATATCTCCATGCCATGGTTCCAAATAAATAGCAAAAGC 232973 Query 38157 TCCTGGTCT 38165 ||| ||||| Sbjct 232974 TCCGGGTCT 232982 Score = 96.9 bits (106), Expect = 3e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468 |||||| |||| |||||| || ||||| ||||| |||| ||||||| || | | Sbjct 234735 TGGAGTAGCGGCACCAAATAACGTTGGAGAAGCATGGGTGAAATATTTTTCAGAGAGTAA 234794 Query 38469 ATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCAT 38528 |||||||||||| || | |||||||| |||| || || || | ||||| | ||| Sbjct 234795 ATTATATGTTTCAATAGCTGAGTCTATATCTTCGCCATGGATTCCAACGGATACTCGCAT 234854 Query 38529 TAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTC 38588 | ||||||||| |||||||| | | |||| ||| ||| | || ||| ||| |||| Sbjct 234855 CAACATATGTTGAGGTCTTTCGACAACTTTACCATTGATTTTCATTAAATAAGATCTTTC 234914 Query 38589 TAATGT 38594 || || Sbjct 234915 CAAAGT 234920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468389601312400