Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq5 102 8e-17
seq8572 95.1 1e-14
seq259 89.7 5e-13
>seq5
Length=1739417
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626
|| |||||||| |||||||| || || | || | || | ||||| | |||||||||
Sbjct 582064 GTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCA-TCTTCCAACTGTTTACC 582006
Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686
|||| |||||| ||| || |||||||| || |||||||||||||| ||| || |||
Sbjct 582005 AGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTTGGCTTT 581946
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
|| | ||| | ||||||| || || || || | || | || || ||||| | ||
Sbjct 581945 TACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCGGTGAGGGT 581886
Query 139747 TTTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 581885 CTTCACGAAAATCTGCAT 581868
>seq8572
Length=13345
Score = 95.1 bits (104), Expect = 1e-14
Identities = 116/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 153633 GCAATCGACGCCAAGTTGCAAACGGCAGTTTC-GTCGGGGGCGCAATATTGTACTATTTC 153691
|| || |||||||| |||||||| |||||||| | || | || |||||| || || ||
Sbjct 8743 GCGATGGACGCCAAATTGCAAACAGCAGTTTCCGATGGTGACG-AATATTCGACAATCTC 8685
Query 153692 CGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTTTTGCGGTTACA 153751
|| |||||||||||||||| ||| || ||| | |||||| |||| |||||
Sbjct 8684 GGCGCACAAATTGCTGCATTGAATCGTACCCAAATGTTTCTGATTGGATTTGTAATTACA 8625
Query 153752 AGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTC 153787
|||||||||||| || | ||| ||| || |||||
Sbjct 8624 AGCGTCCTTGTAAAGGACGTACGGTCCTCCCGTTTC 8589
>seq259
Length=588930
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 139575 CTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGA 139634
||||||||||||| ||||| | || || ||||| | ||||| || ||| |||
Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468
Query 139635 TCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGT 139693
||| | ||| ||||| || || || |||||||| || ||| |||| | || | | |
Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATC-TTGAATTTTAGCCTTGACATTT 399409
Query 139694 TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACG 139753
|| | |||||| | ||||| ||||||| ||| | || || || ||||| ||||| ||
Sbjct 399408 TCAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACA 399349
Query 139754 AATATTTGCAT 139764
|| || |||||
Sbjct 399348 AAGATCTGCAT 399338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495920854532000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |