Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq86 199 6e-46 >seq86 Length=611229 Score = 199 bits (220), Expect = 6e-46 Identities = 191/245 (78%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 79033 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 79092 ||| |||| | ||||| ||||||| |||||||||||||| ||||| ||||| |||| | Sbjct 223840 AAATCTCTCAACAGATGATGATTAACAACTTGAAATTCTCCCGACAAAACTCTTCGAGAG 223899 Query 79093 TAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGAT 79152 |||||||| ||||||||||| | |||||||| ||||| |||||||| || || || Sbjct 223900 TAAATATTTGATGTATATGGTTCAAATGATTCATTGTTTCCTAAAATTTGTGCTGTGGAA 223959 Query 79153 GCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCT 79212 || |||||||||||||||| | | | ||| | || |||| | |||||||| ||| Sbjct 223960 GCAGTTGGCATAGGTGCCATAAGAAGAGAATTACGAACGCCGTGTTGACTGATTTTTTCT 224019 Query 79213 TTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGA 79272 |||| | | |||||||||| ||||| | ||| ||||||||| | |||||||||||| Sbjct 224020 TTTAATGCTGCCCAATCCCAGAGATCTGTTGGGGTAACATTCCACATATCATATTGTAGG 224079 Query 79273 ATACC 79277 ||||| Sbjct 224080 ATACC 224084 Score = 136 bits (150), Expect = 6e-27 Identities = 140/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 80346 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT 80405 |||||| || |||||||| || || || |||||||||| |||| ||| || || ||||| Sbjct 234750 AAATAACGTTGGAGAAGCATGGGTGAAATATTTTTCAGAGAGTAAATTATATGTTTCAAT 234809 Query 80406 AGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGG 80465 |||||| |||||||| ||| ||||| || | || ||||| ||||| || ||||| Sbjct 234810 AGCTGAGTCTATATCTTCGCCATGGATTCCAACGGATACTCGCATCAACATATGTTGAGG 234869 Query 80466 TCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACC 80525 |||||| || | || ||| ||||||| || |||||| |||||||||| | |||| | Sbjct 234870 TCTTTCGACAACTTTACCATTGATTTTCATTAAATAAGATCTTTCCAAAGTCTAAAAAAC 234929 Query 80526 AAA 80528 ||| Sbjct 234930 AAA 234932 Score = 129 bits (142), Expect = 8e-25 Identities = 181/254 (71%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 79833 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892 |||| |||||||| | | || | | || || ||||| ||||| |||| ||||| Sbjct 232728 TTCTTCTTCGTATTTTCTGTAGAGTGCATCAAATTCGTCACCCCAGCAATCGCTCAATCC 232787 Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAA 79952 |||||| || ||||||||||| ||| |||||| | ||||||| ||||||| Sbjct 232788 TGGACATCTGTTCGGACACATCAAACTCCAAGTTCCATCTGATTCTACTCGTCTCATAAA 232847 Query 79953 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGT 80012 ||| || ||||||||||| ||||| ||||| | |||| ||| || ||||| || Sbjct 232848 TTCATCGGGTATCCAAAGAGCATAAAATAAATCTCGAGCTCTAAACTCTTCTTTTCCCGT 232907 Query 80013 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 ||||||||| | ||| | || | | |||||| |||||| |||||||| || || || Sbjct 232908 ATTCTTTTTTAAATCTAAAAATTCAAAAATATCTCCATGCCATGGTTCCAAATAAATAGC 232967 Query 80073 CATAACTCCCGGTC 80086 | | |||| |||| Sbjct 232968 AAAAGCTCCGGGTC 232981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718061534559400