Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq5 107 1e-18
seq93 96.9 3e-15
>seq5
Length=1739417
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 42906 ATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTG 42965
||||| ||| ||| || || | ||||| || || | |||||| | || ||||| ||
Sbjct 582071 ATGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAACTG 582012
Query 42966 TTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAA 43025
||| || ||||| ||||| ||||||||||||| || | |||||||| || ||||
Sbjct 582011 TTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTT 581952
Query 43026 CTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGT 43085
|||| || | | | |||||| || || || || | || || |||||||||||
Sbjct 581951 GGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCGGT 581892
Query 43086 TAGAGTTTTCACAAAAATTTGCATTTTCTTAA 43117
|| || ||||| ||||| ||||| |||| ||
Sbjct 581891 GAGGGTCTTCACGAAAATCTGCATCTTCTGAA 581860
>seq93
Length=855823
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/218 (70%), Gaps = 1/218 (0%)
Strand=Plus/Minus
Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957
||||||||||||| ||| |||||||| | ||||| ||||| | ||||| ||||
Sbjct 276810 AACACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGATAGGGTACGGCCGTCC 276751
Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017
||||||||||| ||||| ||||||| || ||||| |||| || | || || || ||
Sbjct 276750 TCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCT 276691
Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077
||| ||||||| | | | ||||| | || || || | || || |||
Sbjct 276690 TGGATTTTAGCTTTGACGTTCTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGATTGTT 276631
Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCAT-TTTCT 43114
|| || || | ||| |||||||| || ||||| |||||
Sbjct 276630 TTGCCAGTCAAAGTCTTCACAAAGATCTGCATATTTCT 276593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381262302258930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |