Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq14 102 1e-16 seq8572 95.1 2e-14 >seq14 Length=1403628 Score = 102 bits (112), Expect = 1e-16 Identities = 132/181 (73%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 127483 CCCATGATTCTACCGTGCGGTTTAACGATTCCAGTGTACACGGCAAAGTTGGCCATCGAG 127542 ||||| ||||| || || |||| ||| | | || || || ||||||||||| || Sbjct 1390374 CCCATTATTCTCCCATGTGGTTCAACCAGTGACGTATAGACAGCAAAGTTGGCGGGTGAA 1390315 Query 127543 CCCGAGTACGGTTGTACACACACTCCCCA---TTCGGACTCGTTCAAATTGAACGCTCTG 127599 || ||||| ||||||||| || ||||| ||| | || |||||||| ||| | Sbjct 1390314 CCTGAGTATGGTTGTACATTGACACCCCATTTTTCAGTATC---TAAATTGAAAGCTTTT 1390258 Query 127600 AGACATCGCTGCTGTGCTAGCAGTTCGATGCGATCGATAAACTCGTTACCACCATAGTAT 127659 ||||||| || || ||||| | |||||| |||| ||||| |||||||| ||||| ||| Sbjct 1390257 AGACATCTTTGTTGAGCTAGAATTTCGATTTGATCAATAAATTCGTTACCTCCATAATAT 1390198 Query 127660 C 127660 | Sbjct 1390197 C 1390197 >seq8572 Length=13345 Score = 95.1 bits (104), Expect = 2e-14 Identities = 329/509 (65%), Gaps = 6/509 (1%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || || || || ||||| || ||||| | ||||| ||| | ||||| |||||||| ||| Sbjct 8256 CAAGGAGGAAACAAACGACCGGGCGCGTTTGCCGTGTACATCGAACCGTGGCACGCCGAC 8315 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 |||||||| || | || | ||||| ||||| ||| | || || | ||| Sbjct 8316 ATTTTTGACGTTCTGGACCTTAAAAAAAATACTGGCGCCGAACAAAGTCGGGCGCGCGAC 8375 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || || |||||| | ||| | || |||||||||||| | || | Sbjct 8376 CTGTTCTACGCTCTCTGGATTCCAAACGAATTTATGAAGCGCGTCGAAAACAACGAAATG 8435 Query 97056 TGGAGCCTAATGTGCCCCGACTCG-TCACCCGGTCT--GTCCGATTGCTGGGGCGAAGAG 97112 ||||| || |||||||| | ||| || ||||| || || || | ||| | || Sbjct 8436 TGGAGTCTCATGTGCCCACA-TCGATCGCCCGGGCTTCATCTCAT--ATACGGCAACGAA 8492 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCA 97172 ||||| | ||||| | | |||||| | ||| ||||| | ||| ||||| Sbjct 8493 TTTGAACGCCAGTACGCAGAATACGAGGCGGCCGGCAATTACGTTCGCAAAGTAAATGCA 8552 Query 97173 CGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTC 97232 ||||| || |||| ||||| || || || |||| || ||| |||||| | || Sbjct 8553 CGAGACCTCTGGAGAGCCATTGTCGATGCGCAAATAGAAACGGGAGGACCGTACGTCCTT 8612 Query 97233 TACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCC 97292 |||||||| | ||| ||| ||| || || ||||| || || | || | Sbjct 8613 TACAAGGACGCTTGTAATTACAAATCCAATCAGAAACATTTGGGTACGATTCAATGCAGC 8672 Query 97293 AATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTG 97352 ||| ||||| | || ||||| || || | || || || || || |||||| | || Sbjct 8673 AATTTGTGCGCCGAGATTGTCGAATATTCGTCACCATCGGAAACTGCTGTTTGCAATTTG 8732 Query 97353 GCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 || || || | |||| |||||| || Sbjct 8733 GCGTCCATCGCTTTGCCGCGGTTTGTCGA 8761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740845358104600