Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq259 141 7e-29
seq5 132 3e-26
seq93 127 1e-24
seq8065 95.1 9e-15
>seq259
Length=588930
Score = 141 bits (156), Expect = 7e-29
Identities = 147/193 (76%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 15174 CTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15233
||||||| ||||||||||| ||| |||| | |||||||||||||| || || | |
Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468
Query 15234 TCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTT 15293
|||| | |||||| || ||||||||||||||| || |||||| ||| ||| |||
Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408
Query 15294 CTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15353
| || || |||||| || || || | ||| |||||||| ||||||| |||||| ||||
Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348
Query 15354 AAATTTGCATATT 15366
| || ||||| ||
Sbjct 399347 AGATCTGCATGTT 399335
>seq5
Length=1739417
Score = 132 bits (146), Expect = 3e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
||| |||||||| ||||| || |||||||| || ||| | | | ||||| || ||
Sbjct 582071 ATGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAACTG 582012
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279
||| ||||| | |||||||| ||||| ||| |||||| ||||||||||| || ||
Sbjct 582011 TTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTT 581952
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
| |||||| |||| || || ||| | ||| || || || ||||||||||| || ||
Sbjct 581951 GGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCGGT 581892
Query 15340 CAGAGTTTTTACAAAAATTTGCATATTTGAAAATAAAA 15377
|| || || || ||||| ||||| || ||||||||
Sbjct 581891 GAGGGTCTTCACGAAAATCTGCATCTTCTGAAATAAAA 581854
>seq93
Length=855823
Score = 127 bits (140), Expect = 1e-24
Identities = 160/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
|| || ||||| |||||||| || ||||| |||||||| ||| ||| | | ||||
Sbjct 276810 AACACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGATAGGGTACGGCCGTCC 276751
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| |||||||| || ||| | |||| ||||||||||||| ||| ||||| || |||||
Sbjct 276750 TCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCT 276691
Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330
||||| ||| || || | || ||||| || |||||| || | ||| || ||
Sbjct 276690 TGGATTTTAGCT-TTGACGTTCTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGATTGT 276632
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367
||| || |||| ||| || ||||| || |||||||||
Sbjct 276631 TTTGCCAGTCAAAGTCTTCACAAAGATCTGCATATTT 276595
>seq8065
Length=22102
Score = 95.1 bits (104), Expect = 9e-15
Identities = 153/217 (71%), Gaps = 5/217 (2%)
Strand=Plus/Minus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
|| || ||||||| ||||| || ||||| |||||||||||| ||| | | ||
Sbjct 20189 AACACCAAATGAATTGTGGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGGTCGCTA 20130
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
| || ||||| || ||| | |||| ||||||||||||| || ||||| ||||||||
Sbjct 20129 ACCAAATGTTTTCCCGCGAAAATCAGACGTTGTTGGTCGGGAGGGATTCCCTCTTTGTCT 20070
Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330
|||||| ||| || ||| | || |||| ||| ||| || || | ||| |||||
Sbjct 20069 TGAATTTTAGCT-TTGACATTATCGGTGGTGTCGGAGGGTTCCACTTCAAGGGTGATGGT 20011
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367
||| | ||| | ||||||| || |||||| ||
Sbjct 20010 TTTGTCATTCA---ATGTTACAAAGATCTGCATAATT 19977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362077301447985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |