Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq259 141 7e-29 seq5 132 3e-26 seq93 127 1e-24 seq8065 95.1 9e-15 >seq259 Length=588930 Score = 141 bits (156), Expect = 7e-29 Identities = 147/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 15174 CTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15233 ||||||| ||||||||||| ||| |||| | |||||||||||||| || || | | Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468 Query 15234 TCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTT 15293 |||| | |||||| || ||||||||||||||| || |||||| ||| ||| ||| Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408 Query 15294 CTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15353 | || || |||||| || || || | ||| |||||||| ||||||| |||||| |||| Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348 Query 15354 AAATTTGCATATT 15366 | || ||||| || Sbjct 399347 AGATCTGCATGTT 399335 >seq5 Length=1739417 Score = 132 bits (146), Expect = 3e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| |||||||| ||||| || |||||||| || ||| | | | ||||| || || Sbjct 582071 ATGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAACTG 582012 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| ||||| | |||||||| ||||| ||| |||||| ||||||||||| || || Sbjct 582011 TTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTT 581952 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | |||||| |||| || || ||| | ||| || || || ||||||||||| || || Sbjct 581951 GGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCGGT 581892 Query 15340 CAGAGTTTTTACAAAAATTTGCATATTTGAAAATAAAA 15377 || || || || ||||| ||||| || |||||||| Sbjct 581891 GAGGGTCTTCACGAAAATCTGCATCTTCTGAAATAAAA 581854 >seq93 Length=855823 Score = 127 bits (140), Expect = 1e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || ||||| |||||||| || ||||| |||||||| ||| ||| | | |||| Sbjct 276810 AACACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGATAGGGTACGGCCGTCC 276751 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || |||||||| || ||| | |||| ||||||||||||| ||| ||||| || ||||| Sbjct 276750 TCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCT 276691 Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 ||||| ||| || || | || ||||| || |||||| || | ||| || || Sbjct 276690 TGGATTTTAGCT-TTGACGTTCTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGATTGT 276632 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 ||| || |||| ||| || ||||| || ||||||||| Sbjct 276631 TTTGCCAGTCAAAGTCTTCACAAAGATCTGCATATTT 276595 >seq8065 Length=22102 Score = 95.1 bits (104), Expect = 9e-15 Identities = 153/217 (71%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || ||||||| ||||| || ||||| |||||||||||| ||| | | || Sbjct 20189 AACACCAAATGAATTGTGGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGGTCGCTA 20130 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 | || ||||| || ||| | |||| ||||||||||||| || ||||| |||||||| Sbjct 20129 ACCAAATGTTTTCCCGCGAAAATCAGACGTTGTTGGTCGGGAGGGATTCCCTCTTTGTCT 20070 Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 |||||| ||| || ||| | || |||| ||| ||| || || | ||| ||||| Sbjct 20069 TGAATTTTAGCT-TTGACATTATCGGTGGTGTCGGAGGGTTCCACTTCAAGGGTGATGGT 20011 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 ||| | ||| | ||||||| || |||||| || Sbjct 20010 TTTGTCATTCA---ATGTTACAAAGATCTGCATAATT 19977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362077301447985