Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq93 98.7 7e-16 seq259 95.1 9e-15 >seq93 Length=855823 Score = 98.7 bits (108), Expect = 7e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 ||||||||||| || ||| || ||||| || || || ||| || ||| | || Sbjct 276810 AACACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGATAGGGTACGGCCGTCC 276751 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 |||||||||||||| || || |||| ||||| ||||| | || | || || || ||| Sbjct 276750 TCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCT 276691 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 ||||| |||||| | | | || |||| || || || || | || |||||| Sbjct 276690 TGGATTTTAGCTTTGACGTTCTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGATTGTT 276631 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || |||||||||||||| || ||||| Sbjct 276630 TTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 276599 >seq259 Length=588930 Score = 95.1 bits (104), Expect = 9e-15 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| || ||||||||||||||||| ||||| | ||| || || | || | ||||||| Sbjct 399494 CATCTTCTAATTGTTTTCCTGCAAAGATCAATCTTTGTTGATCAGGTGGAATTCCTTCTT 399435 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 ||||| |||||| ||||| | ||| ||| || ||||| || || | || | Sbjct 399434 TATCTTGAATTTTAGCCTTGACATTTTCAATAGTGTCGCTAGGCTCAACCTCAAGGGTGA 399375 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATGTCGA 44126 | ||||| || || ||||| || ||||| || ||||||| || Sbjct 399374 TGGTTTTTCCTGTCAAAGTTTTGACAAAGATCTGCATGTTGA 399333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354677783876580