Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1351 161 1e-34 seq192 129 7e-25 >seq1351 Length=133559 Score = 161 bits (178), Expect = 1e-34 Identities = 248/341 (73%), Gaps = 16/341 (5%) Strand=Plus/Minus Query 6898 TGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCC 6957 || ||||| | ||| || | ||||| |||| ||| | |||||| || |||||||| ||| Sbjct 104561 TGTGCAATCATATAAGTCAGTAATGAATAACTAGCAATATTAAATGGCACACCTAAACCC 104502 Query 6958 ATATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTGTCTA--TAGCATAAAATT 7015 ||||| || ||||||||||| ||||||| ||||| ||| | || || |||| || | Sbjct 104501 ATATCAGCAGATCTTTGATATAATTGACACGATAATTTATCAT-TAGCTA-CATAGAACT 104444 Query 7016 GACACAATACATGACATGGAGGTAAAACAGCCTGATCT---ATATCAGAT-GGATTCCAA 7071 || || |||||| || || || ||| | | | ||| ||| ||||||||| Sbjct 104443 GAGCTAAACAATGACAAGGTGG---AAGTGCCATTTTTGGTAGATC-GATAGGATTCCAA 104388 Query 7072 GCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTT-ATAATTATTTG 7130 ||| ||||| || || | |||||||||| |||||||||||| |||| || || ||| Sbjct 104387 GCACACATTATGATTCGACGATCATTTGGA-TTGTTTTTAATTGTGTTGATGATATCTTG 104329 Query 7131 TAATTGATCTATACCCTGACCTTCATAATTAGTATGACA-ATTTATATAATTAGCTCCAA 7189 | ||||||||| || | ||| |||| |||| ||| | | |||| | |||||| Sbjct 104328 AAGTTGATCTATTCCTTTACCAGTGTAATCAGTA-AACATGTCTTTATATTCAGCTCCGT 104270 Query 7190 AATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 |||| | ||||||||| ||||| | |||||||| |||||| Sbjct 104269 AATGACGCCATTGAAAACCATATACGGGACCTAAGTCACCT 104229 >seq192 Length=450475 Score = 129 bits (142), Expect = 7e-25 Identities = 151/201 (75%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 164502 AGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATT 164561 |||||||||||| | ||||| ||| || | |||| || |||||| |||||||| || Sbjct 388225 AGGCTGTAAACACGTCAAAGGTATTCTACTGTATGGTCCCCCTGGTACGGGTAAAACTTT 388166 Query 164562 AATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGG 164618 |||||||||| |||| |||| | |||||| ||||| || ||||| || ||||| Sbjct 388165 AATGGCTCGACAAATTGGTCAA-ATGTTAAATGCACGCGAACC--AAAAATAGTGAATGG 388109 Query 164619 TCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCA 164678 |||| || | || |||||||||| ||||| |||||||| || || ||| |||||| Sbjct 388108 TCCTCAAATTTTAGACAAATATGTTGGTGAATCAGAAGCAAACGTGAGACGATTGTTTGC 388049 Query 164679 GGAGGCTGAAGAAGAACAAAA 164699 || || || |||||| |||| Sbjct 388048 TGACGCGGAGGAAGAAGAAAA 388028 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 ||||||| | ||||| ||||||||||| || ||||| || || || ||| || || | Sbjct 382498 TTCATGACACTGTGGTCAATCAGTTGCTGTCCAAAATTGACGGCGTTGAACAGTTGAACA 382439 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 ||||||| || | || ||||| || |||| ||| | || ||||| || ||||| ||| Sbjct 382438 ATATTTTGGTTATTGGAATGACAAATCGACGAGATATGATCGATGAAGCATTATTGAGAC 382379 Query 164903 CTGGTCGATTAGA 164915 | || || ||||| Sbjct 382378 CCGGACGTTTAGA 382366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595700053686000