Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq1351 161 1e-34
seq192 129 7e-25
>seq1351
Length=133559
Score = 161 bits (178), Expect = 1e-34
Identities = 248/341 (73%), Gaps = 16/341 (5%)
Strand=Plus/Minus
Query 6898 TGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCC 6957
|| ||||| | ||| || | ||||| |||| ||| | |||||| || |||||||| |||
Sbjct 104561 TGTGCAATCATATAAGTCAGTAATGAATAACTAGCAATATTAAATGGCACACCTAAACCC 104502
Query 6958 ATATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTGTCTA--TAGCATAAAATT 7015
||||| || ||||||||||| ||||||| ||||| ||| | || || |||| || |
Sbjct 104501 ATATCAGCAGATCTTTGATATAATTGACACGATAATTTATCAT-TAGCTA-CATAGAACT 104444
Query 7016 GACACAATACATGACATGGAGGTAAAACAGCCTGATCT---ATATCAGAT-GGATTCCAA 7071
|| || |||||| || || || ||| | | | ||| ||| |||||||||
Sbjct 104443 GAGCTAAACAATGACAAGGTGG---AAGTGCCATTTTTGGTAGATC-GATAGGATTCCAA 104388
Query 7072 GCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTT-ATAATTATTTG 7130
||| ||||| || || | |||||||||| |||||||||||| |||| || || |||
Sbjct 104387 GCACACATTATGATTCGACGATCATTTGGA-TTGTTTTTAATTGTGTTGATGATATCTTG 104329
Query 7131 TAATTGATCTATACCCTGACCTTCATAATTAGTATGACA-ATTTATATAATTAGCTCCAA 7189
| ||||||||| || | ||| |||| |||| ||| | | |||| | ||||||
Sbjct 104328 AAGTTGATCTATTCCTTTACCAGTGTAATCAGTA-AACATGTCTTTATATTCAGCTCCGT 104270
Query 7190 AATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230
|||| | ||||||||| ||||| | |||||||| ||||||
Sbjct 104269 AATGACGCCATTGAAAACCATATACGGGACCTAAGTCACCT 104229
>seq192
Length=450475
Score = 129 bits (142), Expect = 7e-25
Identities = 151/201 (75%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 164502 AGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATT 164561
|||||||||||| | ||||| ||| || | |||| || |||||| |||||||| ||
Sbjct 388225 AGGCTGTAAACACGTCAAAGGTATTCTACTGTATGGTCCCCCTGGTACGGGTAAAACTTT 388166
Query 164562 AATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGG 164618
|||||||||| |||| |||| | |||||| ||||| || ||||| || |||||
Sbjct 388165 AATGGCTCGACAAATTGGTCAA-ATGTTAAATGCACGCGAACC--AAAAATAGTGAATGG 388109
Query 164619 TCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCA 164678
|||| || | || |||||||||| ||||| |||||||| || || ||| ||||||
Sbjct 388108 TCCTCAAATTTTAGACAAATATGTTGGTGAATCAGAAGCAAACGTGAGACGATTGTTTGC 388049
Query 164679 GGAGGCTGAAGAAGAACAAAA 164699
|| || || |||||| ||||
Sbjct 388048 TGACGCGGAGGAAGAAGAAAA 388028
Score = 87.8 bits (96), Expect = 2e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842
||||||| | ||||| ||||||||||| || ||||| || || || ||| || || |
Sbjct 382498 TTCATGACACTGTGGTCAATCAGTTGCTGTCCAAAATTGACGGCGTTGAACAGTTGAACA 382439
Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902
||||||| || | || ||||| || |||| ||| | || ||||| || ||||| |||
Sbjct 382438 ATATTTTGGTTATTGGAATGACAAATCGACGAGATATGATCGATGAAGCATTATTGAGAC 382379
Query 164903 CTGGTCGATTAGA 164915
| || || |||||
Sbjct 382378 CCGGACGTTTAGA 382366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595700053686000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |