Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq93 122 8e-23
seq259 89.7 5e-13
seq207 82.4 7e-11
>seq93
Length=855823
Score = 122 bits (134), Expect = 8e-23
Identities = 176/247 (71%), Gaps = 1/247 (0%)
Strand=Plus/Plus
Query 26753 TTTTTAGTCAAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCA 26811
||||| || | | ||| ||||| | ||||| || || || ||||| ||| | ||||||
Sbjct 276582 TTTTTTGTTACAGAAATATGCAGATCTTTGTGAAGACTTTGACTGGCAAAACAATCACCC 276641
Query 26812 TCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAG 26871
| ||| ||||| | |||||||||||| | |||||| || || ||||| || |
Sbjct 276642 TTGAAGTAGAACCCTCAGACACCATCGAGAACGTCAAAGCTAAAATCCAAGACAAGGAGG 276701
Query 26872 GGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA 26931
| || || ||||| |||||| | || |||| || ||| |||||| | || || | | |
Sbjct 276702 GAATCCCACCCGACCAACAACGTCTGATTTTCGCCGGAAAACAATTGGAGGACGGCCGTA 276761
Query 26932 ACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAG 26991
| | |||||| ||||| ||||| ||||| || ||||| |||| || | || || |
Sbjct 276762 CCCTATCCGACTACAACATCCAAAAGGAATCCACCCTCCATTTGGTGTTGCGTCTCAGGG 276821
Query 26992 GAGGAAA 26998
|||||||
Sbjct 276822 GAGGAAA 276828
>seq259
Length=588930
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | ||||| ||||| || || |||||| | |||||| | || | || |
Sbjct 399334 CAACATGCAGATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAGGTTGAGCC 399393
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
| |||||| || || | ||||| || ||| || |||||||| || || || ||
Sbjct 399394 TAGCGACACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGA 399453
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|||||||||| | || | | || |||||| | ||||||| |||| | || ||
Sbjct 399454 TCAACAAAGATTGATCTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTA 399513
Query 26945 TAACATTCAAAAAG 26958
|||||||||||||
Sbjct 399514 CAACATTCAAAAAG 399527
>seq207
Length=511460
Score = 82.4 bits (90), Expect = 7e-11
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 26870 AGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG 26929
||| || || || ||||| || |||| || | || ||| |||||| | |||||||| |
Sbjct 362003 AGGTATCCCACCTGATCAGCAGCGACTTATCTTCGCCGGAAAACAATTAGAAGATGACAA 361944
Query 26930 AAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGA 26984
|| | | ||||||||||||||||||||||| || ||||| |||| |||||
Sbjct 361943 AACCCTATCTGACTATAACATTCAAAAAGAATCCACACTCCATTTGGTATTGAGA 361889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478524275981200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |