Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1351 122 2e-22 seq86 96.9 9e-15 >seq1351 Length=133559 Score = 122 bits (134), Expect = 2e-22 Identities = 223/325 (69%), Gaps = 10/325 (3%) Strand=Plus/Plus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 |||||| | || || || || || ||||||||||| || | || || || || ||| Sbjct 104229 AGGTGACTTAGGTCCCGTATATGGTTTTCAATGGCGTCATTACGGAGCTGAATATAAAGA 104288 Query 111548 CATGCACGACTCATATGATTCACAGG-----GAACTGATCAATTACAGAATGTCATTGAT 111602 |||| ||| || | ||| || ||| |||||| | || || |||| | Sbjct 104289 CATGTTT-ACTGAT----TACACTGGTAAAGGAATAGATCAACTTCAAGATATCATCAAC 104343 Query 111603 CAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCA 111662 |||||| ||||| |||| | |||||| || || ||| |||| ||||| || | | Sbjct 104344 ACAATTAAAAACAATCCAAATGATCGTCGAATCATAATGTGTGCTTGGAATCCTATCGAT 104403 Query 111663 TTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGG 111722 | |||||||||||||||||| |||||| | | ||||| |||||| | | Sbjct 104404 CTACCAAAAATGGCACTTCCACCTTGTCATTGTTTAGCTCAGTTCTATGTAGCTAATGAT 104463 Query 111723 ATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAAT 111782 | | || || ||| | ||||| ||||||||||||| ||| | ||||| || |||||| Sbjct 104464 AAATTATCGTGTCAATTATATCAAAGATCTGCTGATATGGGTTTAGGTGTGCCATTTAAT 104523 Query 111783 ATTGCAAGTTACGCACTACTTACTT 111807 ||||| ||||| || |||| |||| Sbjct 104524 ATTGCTAGTTATTCATTACTGACTT 104548 Score = 96.9 bits (106), Expect = 9e-15 Identities = 123/169 (73%), Gaps = 3/169 (2%) Strand=Plus/Plus Query 111275 TTTATTTGGAGAAACAATGCGTTTTAATCTGTCAACTCAT---TTTCCACTTCTCACAAC 111331 ||| ||||| | | |||| | ||| |||| |||| | | |||||| | ||||| || Sbjct 103080 TTTGTTTGGTGCACAAATGAGATTTGATCTATCAAATGAAGTATTTCCATTACTCACTAC 103139 Query 111332 AAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTAC 111391 ||| || || |||||| ||| |||| |||||| | || |||||||| || ||| Sbjct 103140 AAAAAGAGTATTTTGGAAAGGAGTTGTTGAAGAATTACTTTGGTTTATCAAAGGTTCTAC 103199 Query 111392 AAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAAT 111440 |||||| || |||||| | | ||| |||||||||||||||| |||| Sbjct 103200 AAATGCGAAGGAACTTTCTGATAAAGGTGTAAAAATTTGGGATCCAAAT 103248 >seq86 Length=611229 Score = 96.9 bits (106), Expect = 9e-15 Identities = 88/110 (80%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 364100 AGACAA-TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 |||||| |||| || ||| |||||||||||||| ||||||| || ||||| |||||| Sbjct 232375 AGACAAGTTCCAGCTAGAAAGTTATGGTTTGCCATCTTGGATTCTCAAATTGAAACAGGA 232316 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCA 364208 || |||||||||||||| || ||||| || || | || || ||||| || Sbjct 232315 ACCCCCTATATGTTGTATAAGGATTCTTGTAATAGAAAATCAAACCAACA 232266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302968098552470