Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1351 122 2e-22
seq86 96.9 9e-15
>seq1351
Length=133559
Score = 122 bits (134), Expect = 2e-22
Identities = 223/325 (69%), Gaps = 10/325 (3%)
Strand=Plus/Plus
Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547
|||||| | || || || || || ||||||||||| || | || || || || |||
Sbjct 104229 AGGTGACTTAGGTCCCGTATATGGTTTTCAATGGCGTCATTACGGAGCTGAATATAAAGA 104288
Query 111548 CATGCACGACTCATATGATTCACAGG-----GAACTGATCAATTACAGAATGTCATTGAT 111602
|||| ||| || | ||| || ||| |||||| | || || |||| |
Sbjct 104289 CATGTTT-ACTGAT----TACACTGGTAAAGGAATAGATCAACTTCAAGATATCATCAAC 104343
Query 111603 CAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCA 111662
|||||| ||||| |||| | |||||| || || ||| |||| ||||| || | |
Sbjct 104344 ACAATTAAAAACAATCCAAATGATCGTCGAATCATAATGTGTGCTTGGAATCCTATCGAT 104403
Query 111663 TTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGG 111722
| |||||||||||||||||| |||||| | | ||||| |||||| | |
Sbjct 104404 CTACCAAAAATGGCACTTCCACCTTGTCATTGTTTAGCTCAGTTCTATGTAGCTAATGAT 104463
Query 111723 ATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAAT 111782
| | || || ||| | ||||| ||||||||||||| ||| | ||||| || ||||||
Sbjct 104464 AAATTATCGTGTCAATTATATCAAAGATCTGCTGATATGGGTTTAGGTGTGCCATTTAAT 104523
Query 111783 ATTGCAAGTTACGCACTACTTACTT 111807
||||| ||||| || |||| ||||
Sbjct 104524 ATTGCTAGTTATTCATTACTGACTT 104548
Score = 96.9 bits (106), Expect = 9e-15
Identities = 123/169 (73%), Gaps = 3/169 (2%)
Strand=Plus/Plus
Query 111275 TTTATTTGGAGAAACAATGCGTTTTAATCTGTCAACTCAT---TTTCCACTTCTCACAAC 111331
||| ||||| | | |||| | ||| |||| |||| | | |||||| | ||||| ||
Sbjct 103080 TTTGTTTGGTGCACAAATGAGATTTGATCTATCAAATGAAGTATTTCCATTACTCACTAC 103139
Query 111332 AAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTAC 111391
||| || || |||||| ||| |||| |||||| | || |||||||| || |||
Sbjct 103140 AAAAAGAGTATTTTGGAAAGGAGTTGTTGAAGAATTACTTTGGTTTATCAAAGGTTCTAC 103199
Query 111392 AAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAAT 111440
|||||| || |||||| | | ||| |||||||||||||||| ||||
Sbjct 103200 AAATGCGAAGGAACTTTCTGATAAAGGTGTAAAAATTTGGGATCCAAAT 103248
>seq86
Length=611229
Score = 96.9 bits (106), Expect = 9e-15
Identities = 88/110 (80%), Gaps = 1/110 (1%)
Strand=Plus/Minus
Query 364100 AGACAA-TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158
|||||| |||| || ||| |||||||||||||| ||||||| || ||||| ||||||
Sbjct 232375 AGACAAGTTCCAGCTAGAAAGTTATGGTTTGCCATCTTGGATTCTCAAATTGAAACAGGA 232316
Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCA 364208
|| |||||||||||||| || ||||| || || | || || ||||| ||
Sbjct 232315 ACCCCCTATATGTTGTATAAGGATTCTTGTAATAGAAAATCAAACCAACA 232266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302968098552470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |