Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq93 107 2e-18
seq8065 91.5 1e-13
seq5 84.2 2e-11
>seq93
Length=855823
Score = 107 bits (118), Expect = 2e-18
Identities = 164/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| | || | || |||| ||| || ||||| |||||||| |||||||||||||
Sbjct 276825 CCTCCCCTGAGACGCAACACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAT 276766
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | |||||||||||||||| || || |||| || || |||||||| ||
Sbjct 276765 AGGGTACGGCCGTCCTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGG 276706
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||| ||||| || || ||| || || | | | ||||| ||| ||
Sbjct 276705 ATTCCCTCCTTGTCTTGGATTTTAGCT--TTGACGTTCTCGATGGTGTCTGAGGGTTCTA 276648
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
||| | |||||| ||||| || |||| || || ||||| |||||||| ||
Sbjct 276647 CTTCAAGGGTGATTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCATATT 276596
>seq8065
Length=22102
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 7/229 (3%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||||| || | || |||| ||| | ||||| |||||||| |||||||| ||||
Sbjct 20204 CCTCCTCCGAGACGCAACACCAAATGAATTGTGGATTCCTTTTGGATGTTGTAATCGGAT 20145
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | || |||| ||||| ||||| |||| || || |||||||| |||
Sbjct 20144 AGGGTACGGTCGCTAACCAAATGTTTTCCCGCGAAAATCAGACGTTGTTGGTCGGGAGGG 20085
Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||||||||| ||||| ||| || || | | |||||| ||| |||
Sbjct 20084 ATTCCCTCTTTGTCTTGAATTTTAGCT--TTGACATTATCGGTGGTGTCGGAGGGTTCCA 20027
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||| | |||||||||||| | ||| ||| ||||| ||||||||
Sbjct 20026 CTTCAAGGGTGATGGTTTTGTCATTCAATGTT---ACAAAGATCTGCAT 19981
>seq5
Length=1739417
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/209 (69%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 16732 ATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTG 16791
||| || |||||||| || || ||||||||||| | | || | || ||||| ||
Sbjct 582071 ATGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAACTG 582012
Query 16792 TTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATT 16849
||| || ||| | || | |||||||| || || | ||| |||||||| || ||
Sbjct 582011 TTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTT 581952
Query 16850 TGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCG 16909
||| || || | | | ||||||| || || ||||| || ||||||||||||
Sbjct 581951 GGCT--TTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCG 581894
Query 16910 GTCAGCGTTTTGACAAAAATCTGCATTTT 16938
|| || || || || ||||||||||| ||
Sbjct 581893 GTGAGGGTCTTCACGAAAATCTGCATCTT 581865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404974029124150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |