Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq116 138 1e-27 seq6822 136 4e-27 seq1829 134 2e-26 seq25 129 7e-25 seq999 122 1e-22 >seq116 Length=502924 Score = 138 bits (152), Expect = 1e-27 Identities = 101/115 (88%), Gaps = 3/115 (3%) Strand=Plus/Minus Query 126246 ATTTTGCGCTTCTATTTACA-GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGA 126304 ||||| | ||||| | || ||||||||||||||| |||||||||||||||||||||| Sbjct 408760 ATTTTACTATTCTAATGTCAAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGC 408701 Query 126305 TCTGGTTCCC--TCGGGAGCGTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||||| | ||||||||||||||||||||||||||||||||||| || || Sbjct 408700 TCTGGTTCCCAATTGGGAGCGTGGGTTCGAACCCCACACCTGACAAATTTTTTTT 408646 >seq6822 Length=12017 Score = 136 bits (150), Expect = 4e-27 Identities = 94/104 (90%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||| Sbjct 8075 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGC 8016 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 ||||||||||||||||||||||||||| |||| || |||||| Sbjct 8015 GTGGGTTCGAACCCCACACCTGACAAA-TATTTTTATTATTTTT 7973 >seq1829 Length=51911 Score = 134 bits (148), Expect = 2e-26 Identities = 83/88 (94%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||| Sbjct 20030 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGC 19971 Query 126323 GTGGGTTCGAACCCCACACCTGACAAAT 126350 |||||||||||||||||||||||||||| Sbjct 19970 GTGGGTTCGAACCCCACACCTGACAAAT 19943 >seq25 Length=1185957 Score = 129 bits (142), Expect = 7e-25 Identities = 96/109 (88%), Gaps = 5/109 (5%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 ||||||||||||||| |||||||||||||||||||||| |||||||||| | ||||||| Sbjct 420120 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGCG 420179 Query 126324 TGGGTTCGAACCCCACACCTGACAA--ATTATT-ATTGGAATTTTTGTT 126369 ||||||||||||||||||||||||| ||| || ||| | ||||| || Sbjct 420180 TGGGTTCGAACCCCACACCTGACAAGCATTTTTGATTAGTCTTTTTATT 420228 >seq999 Length=111422 Score = 122 bits (134), Expect = 1e-22 Identities = 85/96 (89%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 126273 TGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGGGTTC 126330 |||||||| |||||||||||||||||||||| |||||||||| | |||||||||||||| Sbjct 6027 TGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGCGTGGGTTC 5968 Query 126331 GAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 |||||||||||||||||||| || || |||||| Sbjct 5967 GAACCCCACACCTGACAAATATTTTTTTATATTTTT 5932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556700110855400