Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq259 91.5 1e-13 seq93 82.4 6e-11 >seq259 Length=588930 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 || ||||| || ||||||||||| |||| || |||||||| ||| | || || || Sbjct 399335 AACATGCAGATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAGGTTGAGCCT 399394 Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303 ||||| || ||| | || || |||||| || |||||||| |||| ||| Sbjct 399395 AGCGACACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGAT 399454 Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363 |||||||| | || | ||| || |||||||| |||||| | |||| | | ||||| Sbjct 399455 CAACAAAGATTGATCTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTAC 399514 Query 111364 AATATACAAAAAG 111376 || || ||||||| Sbjct 399515 AACATTCAAAAAG 399527 >seq93 Length=855823 Score = 82.4 bits (90), Expect = 6e-11 Identities = 165/243 (68%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 111183 AAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACC 111242 ||| ||||| || ||||| || || |||| |||||||| || ||| | ||| ||||| Sbjct 276595 AAATATGCAGATCTTTGTGAAGACTTTGACTGGCAAAACAATCACCCTTGAAGTAGAACC 276654 Query 111243 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111302 | || | | | | || ||| ||||| ||||| || || | || ||| Sbjct 276655 CTCAGACACCATCGAGAACGTCAAAGCTAAAATCCAAGACAAGGAGGGAATCCCACCCGA 276714 Query 111303 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGAT 111360 |||||| | || |||| || || ||||||||||| || | | |||| |||| Sbjct 276715 CCAACAACGTCTGATTTTCGCCGGAAAACAATTGGAGGACGGCCGTACCCTAT--CCGAC 276772 Query 111361 TATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATAAA 111420 || || || ||||| ||||| || || ||||| ||||||||||| | || || || || Sbjct 276773 TACAACATCCAAAAGGAATCCACCCTCCATTTGGTGTTGCGTCTCAGGGGAGGAAAGCAA 276832 Query 111421 TAA 111423 ||| Sbjct 276833 TAA 276835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422920978357000