Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq5 125 6e-24
seq8065 93.3 4e-14
seq259 93.3 4e-14
>seq5
Length=1739417
Score = 125 bits (138), Expect = 6e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| ||||||||||| || | |||||| |||||| | |||||||||
Sbjct 582064 GTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAACTGTTTACCA 582005
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| | ||||||||| || || ||||||||||||||||| ||||| ||||
Sbjct 582004 GCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTTGGCTTTT 581945
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | ||| | ||||||| | ||| || |||| || | ||||| ||||| || ||
Sbjct 581944 ACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCGGTGAGGGTC 581885
Query 114366 TTTACAAAAATCTGCAT 114382
|| || |||||||||||
Sbjct 581884 TTCACGAAAATCTGCAT 581868
>seq8065
Length=22102
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/231 (70%), Gaps = 5/231 (2%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | || | ||| || ||||| || || ||||| ||||| ||||||||||||
Sbjct 20207 ATACCTCCTCCGAGACGCAACACCAAATGAATTGTGGATTCCTTTTGGATGTTGTAATCG 20148
Query 114213 CTCATAGTACGAGAATCT-TCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271
| ||||| | || | | ||||| || ||| | || ||||| |||||||| ||
Sbjct 20147 GATAGGGTACG-GTCGCTAACCAAATGTTTTCCCGCGAAAATCAGACGTTGTTGGTCGGG 20089
Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331
||| || || |||||||| ||| || ||| | | || |||||||| || |||
Sbjct 20088 AGGGATTCCCTCTTTGTCTTGAATTTTAGCTTTGACATTATCGGTGGTGTCGGAGGGTTC 20029
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | |||||| | ||| | ||||||| ||||||||
Sbjct 20028 CACTTCAAGGGTGATGGTTTTGTCATTCA---ATGTTACAAAGATCTGCAT 19981
>seq259
Length=588930
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252
||||||||||||||||||| | ||| | |||||| | |||||| || || |||
Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468
Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312
| | | ||||| || || ||||| |||||||| || ||| || || | | ||
Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408
Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372
||| |||||| | | || || || | ||| | ||||| || |||| |||||| ||||
Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348
Query 114373 AAATCTGCATG 114383
| |||||||||
Sbjct 399347 AGATCTGCATG 399337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420016195843020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |