Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq8572 114 2e-20 >seq8572 Length=13345 Score = 114 bits (126), Expect = 2e-20 Identities = 299/451 (66%), Gaps = 14/451 (3%) Strand=Plus/Minus Query 244729 GACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTT 244788 ||||||||||| ||| | || ||||| | || || |||| || | |||||||| || Sbjct 8693 GACAATCTCGGCGCACAAATTGCTGCATTGAATCGTACCCAAATGTTTCTGATTGGATTT 8634 Query 244789 GGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAG 244848 | || || ||||||||||| || | | | || || || || || | || || ||| Sbjct 8633 GTAATTACAAGCGTCCTTGTAAAGGACGTACGGTCCTCCCGTTTCTATTTGCGCATCGAC 8574 Query 244849 GACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT---TGCCCTCTGCCTC 244905 | | |||||||||| | || || || | |||| | | |||| | ||||| Sbjct 8573 AATGGCTCTCCAGAGGTCTCGTGCATTTACTTT---GCGAACGTAATTGCCGGCCGCCTC 8517 Query 244906 GTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA-CG 244964 ||| | |||| || || || ||| ||| | | | || ||||| | || Sbjct 8516 GTATTCTGCGTACTGGCGTTCAAATTCGTTGCCGTATATGAGATGAAGCCCGGGCGATCG 8457 Query 244965 ACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGG 245024 | | |||||||||||||||||| || || | ||| | || ||| || || | Sbjct 8456 ATGT-GGGCACATGAGACTCCACATTTCGTTGTTTTCGACGCGCTTCATAAATTCGTTTG 8398 Query 245025 GGATCCAGAGGGCCTGGAAGAGGTCCCTGGTC---CTCTGCTCGTCCGAGCCAGTGTTCT 245081 | |||||||| || | ||| ||||| | | | || || ||| | |||||| || | Sbjct 8397 GAATCCAGAGAGCGTAGAACAGGTCGCGCGCCCGACTTTGTTCG---GCGCCAGTATTTT 8341 Query 245082 TCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGG 245141 | | || |||| || |||||| | |||| ||||||| || || ||||| || || | | Sbjct 8340 TTTTAAGGTCCAGAACGTCAAAAATGTCGGCGTGCCACGGTTCGATGTACACGGCAAACG 8281 Query 245142 CGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC 245172 |||| || || ||||| ||||| ||||| || Sbjct 8280 CGCCCGGTCGTTTGTTTCCTCCTTGGTCGAC 8250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944066699119600