Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq93 143 6e-29 seq259 140 8e-28 >seq93 Length=855823 Score = 143 bits (158), Expect = 6e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| || || || ||||| || ||||||||||| ||||| Sbjct 276790 TTCCTTTTGGATGTTGTAGTCGGATAGGGTACGGCCGTCCTCCAATTGTTTTCCGGCGAA 276731 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||||||| ||||| ||||||||| || || || |||||||| ||||| ||||| Sbjct 276730 AATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGGATTTTAGCTTTGACGTT 276671 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || | ||||||||| || ||||| || || || |||| |||||| || Sbjct 276670 CTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGATTGTTTTGCCAGTCAAAGTCTTCAC 276611 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 276610 AAAGATCTGCAT 276599 >seq259 Length=588930 Score = 140 bits (154), Expect = 8e-28 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 ||||||| || || || || | || || | ||| |||||||||||||||||||| |||| Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 ||| | |||||| | ||| |||||||||||||| || ||||| || || || |||| Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 | |||| ||||| | || || || || ||||| || || || |||| ||| ||||| | Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348 Query 288464 ATATCTGCAT 288473 | |||||||| Sbjct 399347 AGATCTGCAT 399338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179305485876630