Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq93 113 5e-20
seq2541 111 2e-19
seq2420 111 2e-19
seq772 111 2e-19
seq45 109 6e-19
seq305 105 7e-18
seq4 105 7e-18
seq25 104 3e-17
seq53 98.7 1e-15
seq8065 93.3 5e-14
seq1110 89.7 6e-13
>seq93
Length=855823
Score = 113 bits (124), Expect = 5e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| || | ||||||||||||||| | ||| |||||||| || ||||| || |
Sbjct 276825 CCTCCCCTGAGACGCAACACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAT 276766
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || || |||| || | || || || ||||| || || || || ||||||| |||
Sbjct 276765 AGGGTACGGCCGTCCTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGG 276706
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| | ||||||||| |||||| ||||| || | | ||||| | ||| ||
Sbjct 276705 ATTCCCTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCGATGGTGTCTGAGGGTTCTACT 276646
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
|| | ||||| |||||||| || | ||||| |||||||| ||||| ||
Sbjct 276645 TCAAGGGTGATTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCATATT 276596
>seq2541
Length=72813
Score = 111 bits (122), Expect = 2e-19
Identities = 79/91 (87%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 56992 TTTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 57051
||| | ||||| |||||| |||| | |||||||||| |||||||||||||||||||||
Sbjct 64413 TTTTTAAAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 64472
Query 57052 ACATACTCACCACTATACTACCGAGGATTGA 57082
||||| |||||||||||||||||||||||
Sbjct 64473 GGATACTGACCACTATACTACCGAGGATTGA 64503
>seq2420
Length=127154
Score = 111 bits (122), Expect = 2e-19
Identities = 76/86 (88%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| | ||||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 8312 AAAAAATATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 8371
Query 57058 TCACCACTATACTACCGAGGATTGAA 57083
| ||||||||||||||||||||||||
Sbjct 8372 TGACCACTATACTACCGAGGATTGAA 8397
>seq772
Length=154466
Score = 111 bits (122), Expect = 2e-19
Identities = 79/91 (87%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 56992 TTTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 57051
||| | ||||| |||||| |||| | |||||||||| |||||||||||||||||||||
Sbjct 148472 TTTTTTAAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 148413
Query 57052 ACATACTCACCACTATACTACCGAGGATTGA 57082
||||| |||||||||||||||||||||||
Sbjct 148412 GGATACTGACCACTATACTACCGAGGATTGA 148382
>seq45
Length=1118719
Score = 109 bits (120), Expect = 6e-19
Identities = 75/85 (88%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| |||||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 183627 AAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 183686
Query 57058 TCACCACTATACTACCGAGGATTGA 57082
| |||||||||||||||||||||||
Sbjct 183687 TGACCACTATACTACCGAGGATTGA 183711
>seq305
Length=510274
Score = 105 bits (116), Expect = 7e-18
Identities = 79/92 (86%), Gaps = 2/92 (2%)
Strand=Plus/Minus
Query 56997 GAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||||| |||| |||| | |||||||||| ||||||||||||||||||||| |||
Sbjct 380635 GAAAAATT--CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 380578
Query 57057 CTCACCACTATACTACCGAGGATTGAATATAT 57088
|| ||||||||||||||||||||| |||||
Sbjct 380577 CTGACCACTATACTACCGAGGATTATGTATAT 380546
>seq4
Length=1754129
Score = 105 bits (116), Expect = 7e-18
Identities = 83/97 (86%), Gaps = 2/97 (2%)
Strand=Plus/Plus
Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054
|| ||||| ||||| |||| | |||||||||| ||||||||||||||||||||| |
Sbjct 601195 ATTAAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 601254
Query 57055 TACTCACCACTATACTACCGAGGAT-TGAATA-TATA 57089
|||| |||||||||||||||||||| |||||| ||||
Sbjct 601255 TACTGACCACTATACTACCGAGGATATGAATACTATA 601291
>seq25
Length=1185957
Score = 104 bits (114), Expect = 3e-17
Identities = 74/85 (87%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| ||||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 780480 AAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 780421
Query 57058 TCACCACTATACTACCGAGGATTGA 57082
| |||||||||||||||||||||||
Sbjct 780420 TGACCACTATACTACCGAGGATTGA 780396
>seq53
Length=807806
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 122480 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 122421
Query 57066 ATACTACCGAGGAT 57079
||||||||||||||
Sbjct 122420 ATACTACCGAGGAT 122407
>seq8065
Length=22102
Score = 93.3 bits (102), Expect = 5e-14
Identities = 160/229 (70%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
|||||||| | ||||||||||||||| | |||| |||||||| || |||||||| |
Sbjct 20205 ACCTCCTCCGAGACGCAACACCAAATGAATTGTGGATTCCTTTTGGATGTTGTAATCGGA 20146
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || ||| | | | || || || ||||| || || || || ||||||| ||
Sbjct 20145 TAGGGTACGGTCGCTAACCAAATGTTTTCCCGCGAAAATCAGACGTTGTTGGTCGGGAGG 20086
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | ||| |||| | ||| |||| | ||||| | | |||||| | |||||
Sbjct 20085 GATTCCCTCTTTGT-CTTGAATTTTAGCTTTGACATTATCGGTGGTGTCGGAGGGTTCCA 20027
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | |||||||||||| | | | | |||||||||| |||||
Sbjct 20026 CTTCAAGGGTGATGGTTTTGTCATTCAATG---TTACAAAGATCTGCAT 19981
>seq1110
Length=140048
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078
|||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 120855 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGA 120913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543056049156400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |