Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq8572 127 2e-24 seq5 93.3 4e-14 seq259 82.4 8e-11 >seq8572 Length=13345 Score = 127 bits (140), Expect = 2e-24 Identities = 332/499 (67%), Gaps = 13/499 (3%) Strand=Plus/Minus Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGA--ACTACTGTATTGCACAATTTCTGCGC 154644 |||||||| |||||||| ||| |||| | || | | ||| ||||| || |||| Sbjct 8737 GACGCCAAATTGCAAACAGCAGTTTCCGATGGTGACGAAT--ATTCGACAATCTCGGCGC 8680 Query 154645 ACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGT 154704 ||||||| |||||| |||| || |||| | ||||||||| |||||| || || |||| Sbjct 8679 ACAAATTGCTGCATTGAATCGTACCCAAATGTTTCTGATTGGATTTGTAATTACAAGCGT 8620 Query 154705 CTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACA 154764 | ||||| | | |||||| |||||||| | ||| | || | ||| | | | | Sbjct 8619 CCTTGTAAAGGACGTACGGTCCTCCCGTTTCTATTTGCGCATCGACAATGGCTCTCCAGA 8560 Query 154765 GACTTCGCGCCTCAAC-TTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGT 154823 | ||| || | || ||| || ||| | ||| ||| |||| | ||||| | Sbjct 8559 GGTCTCGTGCATTTACTTTGCGAACGTAATTGCCGGCCGC-CTCGTATTCTGCGTACTGG 8501 Query 154824 TTTTCAAACTCTAAACTGTACACGTCCGACAAA--CCGGGACAGCGGTCGGGACACATCA 154881 |||||| || | ||| | | || || ||||| | || | || ||||| | Sbjct 8500 CGTTCAAATTCGTTGCCGTATA--TGAGATGAAGCCCGGGCGATCGATGTGGGCACATGA 8443 Query 154882 ATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGT 154941 |||||||||||| | || ||||| |||||||| | || | ||| | ||||| Sbjct 8442 GACTCCACATTTCGTTGTTTTCGACGCGCTTCATAAATTCGTTTGGAATCCAGAGAGCGT 8383 Query 154942 ACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAAT 155001 | |||| || |||||| | | ||| ||||| | ||| || | | || || | Sbjct 8382 AGAACAGGTCGCGCGCCCGACTTTGTTCGGCGCCAGTATTTTTTTTAAGGTCCAGAACGT 8323 Query 155002 CATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGT---TTTC 155058 || | ||||||||||||||||| || | || ||||| | |||||| ||| |||| Sbjct 8322 CAAAAATGTCGGCGTGCCACGGTTCGATGTACACGGCAAACGCGCCCGGTCGTTTGTTTC 8263 Query 155059 CTCCTTGATCCACGTGACG 155077 ||||||| || || | ||| Sbjct 8262 CTCCTTGGTCGACATAACG 8244 >seq5 Length=1739417 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||| | || || ||||| ||||||||||| |||| | || || | ||||| | | Sbjct 582073 AGATGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAAC 582014 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 || || || ||| | || | ||||| || ||||| ||||| |||||||| ||||| || Sbjct 582013 TGTTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATC 581954 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || |||||| || | || || | || ||||| | ||| | ||| || ||| Sbjct 581953 TTGGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCG 581894 Query 64418 GTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || || |||||||| ||||| || Sbjct 581893 GTGAGGGTCTTCACGAAAATCTGCATCTT 581865 >seq259 Length=588930 Score = 82.4 bits (90), Expect = 8e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 ||||||||||||||||||||| | || | | ||||| | || || || ||| | | Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | | | || || || || |||||||||||||| ||||| ||||| ||| ||| | Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | || || | | || || || | || | ||| || || ||||||||||| || | Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348 Query 64434 AAATTTGCATTTT 64446 | || ||||| || Sbjct 399347 AGATCTGCATGTT 399335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499500621247400