Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq5 140 2e-28
seq259 132 3e-26
>seq5
Length=1739417
Score = 140 bits (154), Expect = 2e-28
Identities = 162/217 (75%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| ||||| || ||||| || |||||||| || ||| | | | ||||| || ||
Sbjct 582071 ATGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAACTG 582012
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||| ||||| | |||||||||||||| ||| |||||| ||||| ||||| || ||
Sbjct 582011 TTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTT 581952
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| ||||||| |||| ||||| ||| | ||| || || || ||||||||||| || ||
Sbjct 581951 GGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCGGT 581892
Query 15153 CAGAGTTTTTACAAAAATTTGCATATT-TGAAATAAA 15188
|| || || || ||||| ||||| || |||||||||
Sbjct 581891 GAGGGTCTTCACGAAAATCTGCATCTTCTGAAATAAA 581855
>seq259
Length=588930
Score = 132 bits (146), Expect = 3e-26
Identities = 145/193 (75%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 14987 CTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15046
||||||| ||||||||||| ||| |||| | |||||||||||||| || || | |
Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468
Query 15047 TCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTT 15106
|||| | ||||| || |||||||||||| || || |||||| || ||| |||
Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408
Query 15107 CTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15166
| ||||| |||||| || || || | ||| |||||||| ||||||| |||||| ||||
Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348
Query 15167 AAATTTGCATATT 15179
| || ||||| ||
Sbjct 399347 AGATCTGCATGTT 399335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357291448319225
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |