Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq93 125 6e-24 seq259 105 6e-18 seq5 98.7 9e-16 seq8065 95.1 1e-14 seq86 91.5 1e-13 seq8572 86.0 6e-12 >seq93 Length=855823 Score = 125 bits (138), Expect = 6e-24 Identities = 172/238 (72%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 45104 TTATTTTATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATT 45163 ||||| ||||||| | ||| | |||||| | ||| || || |||||||||||||| || Sbjct 276835 TTATTGCTTTCCTCCCCTGAGACGCAACACCAAATGGAGGGTGGATTCCTTTTGGATGTT 276776 Query 45164 ATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTG 45223 || ||| | ||| || |||||||||||||| ||| | |||| ||||| || Sbjct 276775 GTAGTCGGATAGGGTACGGCCGTCCTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTG 276716 Query 45224 GTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGG 45282 ||| || || || || || || ||||| ||||| ||||| || | || | |||||| | Sbjct 276715 GTCGGGTGGGATTCCCTCCTTGTCTTGGATTTTAGCTTTGA-CGTTCTCGATGGTGTCTG 276657 Query 45283 AAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | | || ||||| || || | |||||||| || | ||| || ||||| || ||||| Sbjct 276656 AGGGTTCTACTTCAAGGGTGATTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 276599 >seq259 Length=588930 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || |||||||||||||| | ||||||| ||| || || || ||||| |||||||| Sbjct 399493 ATCTTCTAATTGTTTTCCTGCAAAGATCAATCTTTGTTGATCAGGTGGAATTCCTTCTTT 399434 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||||||| |||| ||| | |||||| || ||| || || || || | Sbjct 399433 ATCTTGAATTTTAGCCTTGACATTTTCAATAGTGTCGCTAGGCTCAACCTCAAGGGTGAT 399374 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | |||||| ||||| || ||||| Sbjct 399373 GGTTTTTCCTGTCAAAGTTTTGACAAAGATCTGCAT 399338 >seq5 Length=1739417 Score = 98.7 bits (108), Expect = 9e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| ||||| ||||| || || | ||||| || || || || || |||||||||||||| Sbjct 582023 ATCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTT 581964 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || ||| | ||| | |||||||||| || ||||| | ||||| Sbjct 581963 GTCTTGGATCTTGGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAAT 581904 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| ||||| || || || || ||||| |||||| Sbjct 581903 GGTTTTTCCGGTGAGGGTCTTCACGAAAATCTGCATC 581867 >seq8065 Length=22102 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/233 (70%), Gaps = 9/233 (4%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | ||| | |||||| | ||| | || |||||||||||||| || |||||| Sbjct 20207 ATACCTCCTCCGAGACGCAACACCAAATGAATTGTGGATTCCTTTTGGATGTTGTAATCG 20148 Query 45171 CTGACGGTTTTAGAATCGT---CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCC 45227 | ||| | ||| |||| |||||||| ||| | |||| ||||| ||||| Sbjct 20147 GATAGGGT---ACGGTCGCTAACCAAATGTTTTCCCGCGAAAATCAGACGTTGTTGGTCG 20091 Query 45228 GGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGAC 45287 || || || || ||||| ||||||||||| ||||| || ||||||||| | Sbjct 20090 GGAGGGATTCCCTCTTTGTCTTGAATTTTAGCTTTGACATTATCGGTGGTGTCGGAGGGT 20031 Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || || | |||||| | | | | ||||||| || ||||| Sbjct 20030 TCCACTTCAAGGGTGATGGTTTTGTCATTCA---ATGTTACAAAGATCTGCAT 19981 >seq86 Length=611229 Score = 91.5 bits (100), Expect = 1e-13 Identities = 172/251 (69%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 124097 AGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGT 124156 |||||| | || || || |||||||||| ||| || ||| || | ||||| ||| | Sbjct 224085 AGGTATCCTACAATATGATATGTGGAATGTTACCCCAACAGATCTCTGGGATTGGGCAGC 224026 Query 124157 TTTAAAACAACGCATA--TCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATG 124214 |||||| || || || || |||| | ||||| || || | |||| ||| Sbjct 224025 ATTAAAAGAAAAAATCAGTCAAC--ACGGCGTTCGTAATTCTCTTCTTATGGCACCTATG 223968 Query 124215 CCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAAC 124274 || || || |||| || ||||||||||||||||| ||||| || || || | || Sbjct 223967 CCAACTGCTTCCACAGCACAAATTTTAGGAAACAATGAATCATTTGAACCATATACATCA 223908 Query 124275 AATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCATTTGGTG 124334 ||| | ||| ||| |||| || | || || |||||||| | ||||||||| || || Sbjct 223907 AATATTTACTCTCGAAGAGTTTTGTCGGGAGAATTTCAAGTTGTTAATCATCATCTGTTG 223848 Query 124335 GACGACTTGGT 124345 || ||||| Sbjct 223847 AGAGATTTGGT 223837 >seq8572 Length=13345 Score = 86.0 bits (94), Expect = 6e-12 Identities = 291/450 (65%), Gaps = 5/450 (1%) Strand=Plus/Plus Query 123270 GTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCAC 123326 |||||||| || || |||||| |||||| | || | || | |||||||||||| Sbjct 8250 GTCGACCAAGGAGGAAACAAACGACCGGGCGCGTTTGCCGTGTACATCGAACCGTGGCAC 8309 Query 123327 GTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCC 123386 | || | | || || | | | ||| || | || || ||| ||| || Sbjct 8310 GCCGACATTTTTGACGTTCTGGACCTTAAAAAAAATACTGGCGCCGAACAAAGTCGGGCG 8369 Query 123387 CGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGAC 123446 ||||| |||| |||||| | ||| | || | |||||| ||||| || || || Sbjct 8370 CGCGACCTGTTCTACGCTCTCTGGATTCCAAACGAATTTATGAAGCGCGTCGAAAACAAC 8429 Query 123447 GGCGTGTGGTCGCTCATGTGTCCCGATCGGT-GTCCCGGCTTGAGCGACGTTTACGGCAA 123505 | ||||| |||||||| || |||| | | || ||||| | | | | |||||||| Sbjct 8430 GAAATGTGGAGTCTCATGTGCCCACATCGATCGCCCGGGCTTCATC-TCATATACGGCAA 8488 Query 123506 TCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAGGTTCC 123565 | ||||| |||||| |||||||| | ||||| | ||| | | || Sbjct 8489 CGAATTTGAACGCCAGTACGCAGAATACGAGGCGGCCGGCAATTACGTTCGCAAAGTAAA 8548 Query 123566 GGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGTACAT 123625 ||||| || | | | | ||| |||| | ||| | ||||| ||| |||||| | Sbjct 8549 TGCACGAGACCTCTGGAGAGCCATTGTCGATGCGCAAATAGAAACGGGAGGACCGTACGT 8608 Query 123626 GCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATG 123685 || ||||| ||||| || || ||| ||||||||| | ||||| || || |||| Sbjct 8609 CCTTTACAAGGACGCTTGTAATTACAAATCCAATCAGAAACATTTGGGTACGATTCAATG 8668 Query 123686 TAGTAATCTTTGCTCCGAAATTATCGAATA 123715 || ||| | ||| |||| ||| ||||||| Sbjct 8669 CAGCAATTTGTGCGCCGAGATTGTCGAATA 8698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451872768826600