Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 2e-17
seq93 98.7 2e-15
>seq5
Length=1739417
Score = 105 bits (116), Expect = 2e-17
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483
|| ||||| || ||||| || || | ||||||||| | | ||| | ||||||||||| |
Sbjct 582073 AGATGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAAC 582014
Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543
|| || || || ||||| | |||||| || || || ||| |||||| || || |||
Sbjct 582013 TGTTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATC 581954
Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603
|| || || ||||| ||||| | | ||| || ||||| || || || || ||
Sbjct 581953 TTGGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCG 581894
Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626
||||| || ||||| ||||| ||
Sbjct 581893 GTGAGGGTCTTCACGAAAATCTG 581871
>seq93
Length=855823
Score = 98.7 bits (108), Expect = 2e-15
Identities = 144/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
||||| || || |||||||||| ||||||||| | | || | || || |||| ||
Sbjct 276801 TGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGATAGGGTACGGCCGTCCTCCAATTGT 276742
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
||||||||||| || ||||| || ||||| || ||||| || || || || |||
Sbjct 276741 TTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGGAT-TTT 276683
Query 199547 TGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
|| || ||| |||| |||||||| | |||||| || | ||||| || || || ||
Sbjct 276682 AGCTTTGACGTTCTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGATTGTTTTGCCAGT 276623
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
| ||| |||||||| || ||
Sbjct 276622 CAAAGTCTTCACAAAGATCTG 276602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178572902621695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |