Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq93 122 1e-22 seq8065 84.2 2e-11 >seq93 Length=855823 Score = 122 bits (134), Expect = 1e-22 Identities = 180/255 (71%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 46358 TATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTG 46417 |||| || ||||| || | ||||||||||| ||| | || ||||||||||| ||| Sbjct 276834 TATTGCTTTCCTCCCCTGAGACGCAACACCAAATGGAGGGTGGATTCCTTTTGGATGTTG 276775 Query 46418 TAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGG 46477 ||||||||||| || || |||| || | || || |||||||| |||| || || ||| Sbjct 276774 TAGTCGGATAGGGTACGGCCGTCCTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGG 276715 Query 46478 TCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTC 46537 |||| || | | ||||||||| ||| || |||| || | | ||||| Sbjct 276714 TCGGGTGGGATTCCCTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCGATGGTGTCTGAG 276655 Query 46538 GATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 | ||| || || | ||||| |||||||| |||| || || |||||||| ||||| || Sbjct 276654 GGTTCTACTTCAAGGGTGATTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCATATTT 276595 Query 46598 C----ACAAACAACA 46608 | ||||| |||| Sbjct 276594 CTGTAACAAAAAACA 276580 >seq8065 Length=22102 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/227 (68%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | ||||||||||| ||| | ||| ||||||||||| ||||| |||||| Sbjct 20204 CCTCCTCCGAGACGCAACACCAAATGAATTGTGGATTCCTTTTGGATGTTGTAATCGGAT 20145 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || ||| | | || || || ||||| |||| || || ||||||| || Sbjct 20144 AGGGTACGGTCGCTAACCAAATGTTTTCCCGCGAAAATCAGACGTTGTTGGTCGGGAGGG 20085 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| || || |||| | | |||||| | |||||| Sbjct 20084 ATTCCCTCTTTGTCTTGAATTTTAGCTTTGACATTATCGGTGGTGTCGGAGGGTTCCACT 20025 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||||||| | ||| ||| |||||||| ||||| Sbjct 20024 TCAAGGGTGATGGTTTTGTCATTCAATGTT---ACAAAGATCTGCAT 19981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565075293394200