Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 4e-12 >seq5 Length=1739417 Score = 86.0 bits (94), Expect = 4e-12 Identities = 118/163 (72%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 39559 CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCT 39618 ||| |||| ||||| ||||| || |||| || |||||||| ||||| | || | |||| Sbjct 582028 CGTCCATCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCT 581969 Query 39619 TCTTTGTC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCA 39676 |||||||| | || || | || || ||| || ||||| | ||| || |||| Sbjct 581968 TCTTTGTCTTGGATCTTGGCTTTTACATTTTCGATA--GTGTCGGAAGGTTCAACTTCCA 581911 Query 39677 AAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||||| ||||| || || | || || ||||| |||||||| Sbjct 581910 AAGTAATGGTTTTTCCGGTGAGGGTCTTCACGAAAATCTGCAT 581868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347271868105805