Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq93 150 2e-31 seq8065 123 2e-23 seq5 87.8 2e-12 >seq93 Length=855823 Score = 150 bits (166), Expect = 2e-31 Identities = 174/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || || || || || | || |||||||| |||||| | || || || | Sbjct 276595 AAATATGCAGATCTTTGTGAAGACTTTGACTGGCAAAACAATCACCCTTGAAGTAGAACC 276654 Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 | | |||| | | | |||| | |||| ||||||| ||||| |||||||| || ||| Sbjct 276655 CTCAGACACCATCGAGAACG-TCAAAGCTAAAATCCAAGACAAGGAGGGAATCCCACCCG 276713 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 ||||||| || || |||| ||| || ||||| |||| |||| || ||||| ||||| Sbjct 276714 ACCAACAACGTCTGATTTTCGCCGGAAAACAATTGGAGGACGGCCGTACCCTATCCGACT 276773 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||||| | || || ||||||||| ||||| | || || || Sbjct 276774 ACAACATCCAAAAGGAATCCACCCTCCATTTGGTGTTGCGTCTCAGGGGAGG 276825 >seq8065 Length=22102 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 38273 CAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAAT 38332 ||||||||||||| | || || || || |||||| | | | | |||| ||||| Sbjct 20007 CAAAACCATCACCCTTGAAGTGGAACCCTCCGACACCACCGATAATGTCAAAGCTAAAAT 20066 Query 38333 CCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCT 38392 | |||||||||||||| || |||||||||| || || |||| |||||| ||||| | Sbjct 20067 TCAAGACAAAGAGGGAATCCCTCCCGACCAACAACGTCTGATTTTCGCGGGAAAACATTT 20126 Query 38393 GGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 || ||| || ||||| ||| |||||||||||||||||| | || | |||||||| Sbjct 20127 GGTTAGCGACCGTACCCTATCCGATTACAACATCCAAAAGGAATCCACAATTCATTTGGT 20186 Query 38453 GCTGCGTTTGAGAGGCGG 38470 | ||||| | |||| || Sbjct 20187 GTTGCGTCTCGGAGGAGG 20204 >seq5 Length=1739417 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38235 TTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTC 38294 ||| | || ||||| || ||||| || || ||||| || |||||||| || | || || Sbjct 581859 TTTCAGAAGATGCAGATTTTCGTGAAGACCCTCACCGGAAAAACCATTACTTTGGAAGTT 581918 Query 38295 GAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCC 38354 || | |||||| | ||| | |||| || |||| |||||||| || ||||| Sbjct 581919 GAACCTTCCGACACTATCGAAAATGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCA 581978 Query 38355 GCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 38414 |||| |||||||| | || | || || |||||| |||| || | || || || Sbjct 581979 CCCGATCAACAGCGTTTGATCTTTGCTGGTAAACAGTTGGAAGATGGACGTACTCTTTCA 582038 Query 38415 GACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||||||||| || || || | || || ||| Sbjct 582039 GACTACAACATTCAGAAAGAGTCCACCCTCCAT 582071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500028468886400