Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq93 150 2e-31
seq8065 123 2e-23
seq5 87.8 2e-12
>seq93
Length=855823
Score = 150 bits (166), Expect = 2e-31
Identities = 174/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || || || || || | || |||||||| |||||| | || || || |
Sbjct 276595 AAATATGCAGATCTTTGTGAAGACTTTGACTGGCAAAACAATCACCCTTGAAGTAGAACC 276654
Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
| | |||| | | | |||| | |||| ||||||| ||||| |||||||| || |||
Sbjct 276655 CTCAGACACCATCGAGAACG-TCAAAGCTAAAATCCAAGACAAGGAGGGAATCCCACCCG 276713
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
||||||| || || |||| ||| || ||||| |||| |||| || ||||| |||||
Sbjct 276714 ACCAACAACGTCTGATTTTCGCCGGAAAACAATTGGAGGACGGCCGTACCCTATCCGACT 276773
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||||||||| | || || ||||||||| ||||| | || || ||
Sbjct 276774 ACAACATCCAAAAGGAATCCACCCTCCATTTGGTGTTGCGTCTCAGGGGAGG 276825
>seq8065
Length=22102
Score = 123 bits (136), Expect = 2e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 38273 CAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAAT 38332
||||||||||||| | || || || || |||||| | | | | |||| |||||
Sbjct 20007 CAAAACCATCACCCTTGAAGTGGAACCCTCCGACACCACCGATAATGTCAAAGCTAAAAT 20066
Query 38333 CCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCT 38392
| |||||||||||||| || |||||||||| || || |||| |||||| ||||| |
Sbjct 20067 TCAAGACAAAGAGGGAATCCCTCCCGACCAACAACGTCTGATTTTCGCGGGAAAACATTT 20126
Query 38393 GGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452
|| ||| || ||||| ||| |||||||||||||||||| | || | ||||||||
Sbjct 20127 GGTTAGCGACCGTACCCTATCCGATTACAACATCCAAAAGGAATCCACAATTCATTTGGT 20186
Query 38453 GCTGCGTTTGAGAGGCGG 38470
| ||||| | |||| ||
Sbjct 20187 GTTGCGTCTCGGAGGAGG 20204
>seq5
Length=1739417
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 38235 TTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTC 38294
||| | || ||||| || ||||| || || ||||| || |||||||| || | || ||
Sbjct 581859 TTTCAGAAGATGCAGATTTTCGTGAAGACCCTCACCGGAAAAACCATTACTTTGGAAGTT 581918
Query 38295 GAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCC 38354
|| | |||||| | ||| | |||| || |||| |||||||| || |||||
Sbjct 581919 GAACCTTCCGACACTATCGAAAATGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCA 581978
Query 38355 GCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 38414
|||| |||||||| | || | || || |||||| |||| || | || || ||
Sbjct 581979 CCCGATCAACAGCGTTTGATCTTTGCTGGTAAACAGTTGGAAGATGGACGTACTCTTTCA 582038
Query 38415 GACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447
||||||||||| || || || | || || |||
Sbjct 582039 GACTACAACATTCAGAAAGAGTCCACCCTCCAT 582071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500028468886400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |